LOCUS XP_011392473 397 aa linear PLN 18-APR-2022
DEFINITION putative ATP-dependent RNA helicase [Ustilago maydis 521].
ACCESSION XP_011392473
VERSION XP_011392473.1
DBLINK BioProject: PRJNA14007
BioSample: SAMN02900459
DBSOURCE REFSEQ: accession XM_011394171.1
KEYWORDS RefSeq.
SOURCE Ustilago maydis 521
ORGANISM Ustilago maydis 521
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
REFERENCE 1 (residues 1 to 397)
AUTHORS Kamper,J., Kahmann,R., Bolker,M., Ma,L.J., Brefort,T.,
Saville,B.J., Banuett,F., Kronstad,J.W., Gold,S.E., Muller,O.,
Perlin,M.H., Wosten,H.A., de Vries,R., Ruiz-Herrera,J.,
Reynaga-Pena,C.G., Snetselaar,K., McCann,M., Perez-Martin,J.,
Feldbrugge,M., Basse,C.W., Steinberg,G., Ibeas,J.I., Holloman,W.,
Guzman,P., Farman,M., Stajich,J.E., Sentandreu,R.,
Gonzalez-Prieto,J.M., Kennell,J.C., Molina,L., Schirawski,J.,
Mendoza-Mendoza,A., Greilinger,D., Munch,K., Rossel,N., Scherer,M.,
Vranes,M., Ladendorf,O., Vincon,V., Fuchs,U., Sandrock,B., Meng,S.,
Ho,E.C., Cahill,M.J., Boyce,K.J., Klose,J., Klosterman,S.J.,
Deelstra,H.J., Ortiz-Castellanos,L., Li,W., Sanchez-Alonso,P.,
Schreier,P.H., Hauser-Hahn,I., Vaupel,M., Koopmann,E.,
Friedrich,G., Voss,H., Schluter,T., Margolis,J., Platt,D.,
Swimmer,C., Gnirke,A., Chen,F., Vysotskaia,V., Mannhaupt,G.,
Guldener,U., Munsterkotter,M., Haase,D., Oesterheld,M., Mewes,H.W.,
Mauceli,E.W., DeCaprio,D., Wade,C.M., Butler,J., Young,S.,
Jaffe,D.B., Calvo,S., Nusbaum,C., Galagan,J. and Birren,B.W.
TITLE Insights from the genome of the biotrophic fungal plant pathogen
Ustilago maydis
JOURNAL Nature 444 (7115), 97-101 (2006)
PUBMED 17080091
REFERENCE 2 (residues 1 to 397)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (15-APR-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 397)
AUTHORS Guldener,U., Munsterkotter,M., Walter,M.C., Mannhaupt,G. and
Kahmann,R.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-2014) Institute of Bioinformatics and Systems
Biology, Helmholtz Zentrum Muenchen, German Research Center for
Environmental Health (GmbH), Ingolstaedter Landstrasse 1,
Neuherberg, Bavaria 85764, Germany
REFERENCE 4 (residues 1 to 397)
AUTHORS Birren,B., Nusbaum,C., Abebe,A., Abouelleil,A., Adekoya,E.,
Ait-zahra,M., Allen,N., Allen,T., An,P., Anderson,M., Anderson,S.,
Arachchi,H., Armbruster,J., Bachantsang,P., Baldwin,J., Barry,A.,
Bayul,T., Blitshsteyn,B., Bloom,T., Blye,J., Boguslavskiy,L.,
Borowsky,M., Boukhgalter,B., Brunache,A., Butler,J., Calixte,N.,
Calvo,S., Camarata,J., Campo,K., Chang,J., Cheshatsang,Y.,
Citroen,M., Collymore,A., Considine,T., Cook,A., Cooke,P.,
Corum,B., Cuomo,C., David,R., Dawoe,T., Degray,S., Dodge,S.,
Dooley,K., Dorje,P., Dorjee,K., Dorris,L., Duffey,N., Dupes,A.,
Elkins,T., Engels,R., Erickson,J., Farina,A., Faro,S., Ferreira,P.,
Fischer,H., Fitzgerald,M., Foley,K., Gage,D., Galagan,J.,
Gearin,G., Gnerre,S., Gnirke,A., Goyette,A., Graham,J.,
Grandbois,E., Gyaltsen,K., Hafez,N., Hagopian,D., Hagos,B.,
Hall,J., Hatcher,B., Heller,A., Higgins,H., Honan,T., Horn,A.,
Houde,N., Hughes,L., Hulme,W., Husby,E., Iliev,I., Jaffe,D.,
Jones,C., Kamal,M., Kamat,A., Kamvysselis,M., Karlsson,E.,
Kells,C., Kieu,A., Kisner,P., Kodira,C., Kulbokas,E., Labutti,K.,
Lama,D., Landers,T., Leger,J., Levine,S., Lewis,D., Lewis,T.,
Lindblad-toh,K., Liu,X., Lokyitsang,T., Lokyitsang,Y., Lucien,O.,
Lui,A., Ma,L.J., Mabbitt,R., Macdonald,J., Maclean,C., Major,J.,
Manning,J., Marabella,R., Maru,K., Matthews,C., Mauceli,E.,
Mccarthy,M., Mcdonough,S., Mcghee,T., Meldrim,J., Meneus,L.,
Mesirov,J., Mihalev,A., Mihova,T., Mikkelsen,T., Mlenga,V.,
Moru,K., Mozes,J., Mulrain,L., Munson,G., Naylor,J., Newes,C.,
Nguyen,C., Nguyen,N., Nguyen,T., Nicol,R., Nielsen,C., Nizzari,M.,
Norbu,C., Norbu,N., O'donnell,P., Okoawo,O., O'leary,S.,
Omotosho,B., O'neill,K., Osman,S., Parker,S., Perrin,D.,
Phunkhang,P., Piqani,B., Purcell,S., Rachupka,T., Ramasamy,U.,
Rameau,R., Ray,V., Raymond,C., Retta,R., Richardson,S., Rise,C.,
Rodriguez,J., Rogers,J., Rogov,P., Rutman,M., Schupbach,R.,
Seaman,C., Settipalli,S., Sharpe,T., Sheridan,J., Sherpa,N.,
Shi,J., Smirnov,S., Smith,C., Sougnez,C., Spencer,B., Stalker,J.,
Stange-thomann,N., Stavropoulos,S., Stetson,K., Stone,C., Stone,S.,
Stubbs,M., Talamas,J., Tchuinga,P., Tenzing,P., Tesfaye,S.,
Theodore,J., Thoulutsang,Y., Topham,K., Towey,S., Tsamla,T.,
Tsomo,N., Vallee,D., Vassiliev,H., Venkataraman,V., Vinson,J.,
Vo,A., Wade,C., Wang,S., Wangchuk,T., Wangdi,T., Whittaker,C.,
Wilkinson,J., Wu,Y., Wyman,D., Yadav,S., Yang,S., Yang,X.,
Yeager,S., Yee,E., Young,G., Zainoun,J., Zembeck,L., Zimmer,A.,
Zody,M. and Lander,E.
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome
Research, 320 Charles Street, Cambridge, MA 02142, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to KIS66039.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..397
/organism="Ustilago maydis 521"
/strain="521"
/culture_collection="FGSC:9021"
/db_xref="taxon:237631"
/chromosome="21"
Protein 1..397
/product="putative ATP-dependent RNA helicase"
/calculated_mol_wt=44925
Region 17..397
/region_name="DEAD-like_helicase_N"
/note="N-terminal helicase domain of the DEAD-box helicase
superfamily; cl28899"
/db_xref="CDD:452890"
Site order(26,42,44..48,51,69..76,173..174)
/site_type="other"
/note="ATP binding site [chemical binding]"
/db_xref="CDD:350803"
Site order(49,53,69,72,208..210,213)
/site_type="other"
/note="Mago interface [polypeptide binding]"
/db_xref="CDD:350803"
Site order(92,136..137,140..141,160,163..165,187..188,191..196,
216..220)
/site_type="other"
/note="Barentsz interface [polypeptide binding]"
/db_xref="CDD:350803"
Site order(100..102,128..129,149..152,155,158,183,186)
/site_type="other"
/note="RNA binding site [nucleotide binding]"
/db_xref="CDD:350803"
CDS 1..397
/locus_tag="UMAG_06129"
/coded_by="XM_011394171.1:1..1194"
/db_xref="GeneID:23565823"
ORIGIN
1 msgginagds klafessehv kvattfdamg lkedllrgiy aynfekpsai qqrailpiir
61 grdviaqaqs gtgktatfsi smlqsidttl retqalvlsp trelaiqiqs vvlalgdyln
121 vqchaciggt svgedirkld ygqhivsgtp grvydmirrr hlrtknikml ildesdelln
181 mgfkdqiydv yrylppstqv vllsatlpqd vlemtskfmt dpvrilvkrd eltlegikqf
241 fvavekeewk fdtlcdlydt ltitqavifc ntrrkvdwls akmkennfqv ssmhgemqqk
301 erdevmaefr qgssrvlitt dvwargidia nislvinydl ptnrenyihr igrsgrfgrk
361 gvainfvtvd dvrtlrdieq fystqidemp vkledml
//
