GenomeNet

Database: RefSeq
Entry: XP_012484536
LinkDB: XP_012484536
Original site: XP_012484536 
LOCUS       XP_012484536            1410 aa            linear   PLN 22-MAY-2015
DEFINITION  PREDICTED: Fanconi anemia group I protein [Gossypium raimondii].
ACCESSION   XP_012484536
VERSION     XP_012484536.1
DBLINK      BioProject: PRJNA282644
DBSOURCE    REFSEQ: accession XM_012629082.1
KEYWORDS    RefSeq.
SOURCE      Gossypium raimondii
  ORGANISM  Gossypium raimondii
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012160873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Gossypium raimondii Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Gossypium raimondii"
                     /db_xref="taxon:29730"
                     /chromosome="6"
                     /note="originally collected in Peru before 1990"
     Protein         1..1410
                     /product="Fanconi anemia group I protein"
                     /calculated_mol_wt=157070
     Region          123..1324
                     /region_name="FANC"
                     /note="Fanconi anemia ID complex proteins FANCI and
                     FANCD2; cl17018"
                     /db_xref="CDD:302591"
     Site            order(153,156..158,195,198..199,232,236,243,276,280..281,
                     283,379,387,390,430,433..434,437,441,444,475,478,481..482,
                     485,514,517..518,521,523,574..576,578..579,582..583,
                     585..587,590,609,612..615,618,621,669)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212593"
     Site            order(288..298,325..334,948..964,967,1022..1043,
                     1067..1084,1123..1124,1125..1135,1193..1221)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212593"
     Site            518
                     /site_type="other"
                     /note="ubiquitination site [posttranslational
                     modification]"
                     /db_xref="CDD:212593"
     CDS             1..1410
                     /gene="LOC105798861"
                     /coded_by="XM_012629082.1:66..4298"
                     /db_xref="GeneID:105798861"
ORIGIN      
        1 mattesaapp lndvdivhla qrkqpsnshq qsnvslppfl lsphchkdll sylhsraasp
       61 spssvvceyv isllslisls pgtptvcsll ssllssytql fpslphdsns lrtiknfntl
      121 lihvpledlk lvidlvasdl sgvvsvddaq lfdllpqcfe lirnaeekgg dyvnsvvdki
      181 ldskwskgfl lkmvsiakef sfldktrgne flekvfvgik tvdlmdlpsl vyqllvlask
      241 gfnkreiieg ivyffgselg skmastvrqv egtvllhvnf avkqdpslgk evmglvksdl
      301 rafnhftvav llsvsrvrrf sessmailkt alltayrdyk ftkeckwipd dikgeylksv
      361 kvveksvlra vnesnygreh mvpsilqfgf illesvgevn ckelgnsngl lgieelgiqm
      421 lktlfevhdm arneimeqvk frilslkpel srpilrllcy liqcypypmm ehiprlkell
      481 dyftfmdgki asylvsallp lirfsrdlrd yailvvrkav frreeavrva atnsiielil
      541 aekqpkgdgl fflqdsssqa scsqqadipc smggdlfqel sallqrclyq qakvkqvvyq
      601 glvklvladp aigglvfdfl lphflqffke gpdvqlgvss ciksengkvl iqepldclls
      661 ciswilllqt hgktdkllds igacfgfsls qenedgrnms tevfsgaflk irkflrnanl
      721 edilgqthda ssaavheekw kcsalilsgv ievvlntvam dlekaadqkv elekeimqfv
      781 drhdslakea stsrqsnagk rpnlratakd atddidsgnp kliqehtffl atssihqlll
      841 malklysses sdikatsqnh sqssssktsk scfkiisfal naslhhvkss aavgnegpmk
      901 kliygeinml gppllrltll lkpgsnvats hrkkeskakk daeerkehll lalfclkemi
      961 tvslcgsclt hllenllsvp elenadlhde cdqaseiddq diknkelfiq kylkplltdl
     1021 mklsafrtve ilcdillmig hklpckwrns hgawairmck tnnttnssia ksmvrlatsl
     1081 sspptdllva qemlkellkf igpnnsdlsq vseylvvnqs ttiaiascll qitdnviidv
     1141 dwstkklkaa sqvaqktihh dqngehnlgf tfeeivysri kavvevlssf vlmslkdnqa
     1201 ehflrltarf yknlaliskl kiapkgqkql lpslqfqklv eltckeltvp lynfvaemqq
     1261 aqqenanskg minkikrenk cipelifqie dyekhlirls katkmnllkh akrstcrdfk
     1321 ildpttavvg qavpnnvgnd ndnenenene nengrcsdse dgnndgngsd kelshevese
     1381 sdaveddras vptvkgvkrs rivhdsddds
//
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