LOCUS       XP_012877673             607 aa            linear   ROD 26-JUN-2015
DEFINITION  PREDICTED: CUB domain-containing protein 2 [Dipodomys ordii].
ACCESSION   XP_012877673
VERSION     XP_012877673.1
DBLINK      BioProject: PRJNA287906
DBSOURCE    REFSEQ: accession XM_013022219.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Dipodomys ordii (Ord's kangaroo rat)
  ORGANISM  Dipodomys ordii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012267277.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Dipodomys ordii Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Dipodomys ordii"
                     /isolate="6190"
                     /db_xref="taxon:10020"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="kidney"
                     /collection_date="26-Jun-2006"
     Protein         1..607
                     /product="CUB domain-containing protein 2"
                     /calculated_mol_wt=66200
     Region          30..140
                     /region_name="CUB"
                     /note="CUB domain; pfam00431"
                     /db_xref="CDD:395345"
     Site            order(38,40,42,69,74,113,137,139,141)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          145..254
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(153,155,157,184,189,225,249,251,253..254)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          259..370
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(265,267,269,296,301,343,367,369)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     CDS             1..607
                     /gene="Cdcp2"
                     /coded_by="XM_013022219.1:78..1901"
                     /db_xref="GeneID:105989949"
ORIGIN      
        1 mlaawgscll lavvllhpgp raqatkgvkc ggvlsapsgn fsspnfprly pyntecswli
       61 vvaegssvll tfhafdleyh dtcgfdflei yngasgdkgn llgrfcgqvp pppfssswhv
      121 msivfhsdkh vashgfsaay qkdvcggvlt glsgvltspe ypnnypnnve chwvihasgp
      181 aavklvfmdf qvegseqcty dyvavlgapg pahghhycgs trpptltslg helqvvfksd
      241 fniggrgfka yyfsgecqel ytavrgnfss pqypgsypnn irchwtirlp pgyrvkvffl
      301 dvdleepnsl trtcdfdhla afdgdseeaa plgnwcgrhl pppitsshnq lllllhtdrs
      361 ttgrgfsvay iggqlgwgdg greeakwgrn wtqmvpmnvs csrtdfqili saqalapler
      421 tkiylgsrsc aaqevgsnfr iqarfdtcgt esqiqpprlr vnrkesvagp gfesglggyv
      481 geqaqprlhq vcympwspqr rnntsvivsv lyidfsaagr edvheyevrc eprrkeasvh
      541 llsgsdwlgp yaataehlqe appgdevevp egpvtmvsqd tsdivflglc ilagvlmvia
      601 ivvlmll
//