LOCUS XP_013381100 3252 aa linear INV 28-FEB-2018
DEFINITION uncharacterized protein LOC106152150 [Lingula anatina].
ACCESSION XP_013381100
VERSION XP_013381100.1
DBLINK BioProject: PRJNA293030
DBSOURCE REFSEQ: accession XM_013525646.2
KEYWORDS RefSeq; includes ab initio.
SOURCE Lingula anatina
ORGANISM Lingula anatina
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda;
Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae;
Lingula.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_019774291.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Lingula anatina Annotation Release
101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 1% of CDS bases
##RefSeq-Attributes-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..3252
/organism="Lingula anatina"
/isolate="Amm_Jpn"
/isolation_source="intertidal zone"
/db_xref="taxon:7574"
/chromosome="Unknown"
/sex="male"
/tissue_type="Gonads"
/dev_stage="adult"
/country="Japan: Amami, Kasari Bay"
/lat_lon="28.4406 N 129.6676 E"
/collection_date="2012"
/collected_by="Nori Satoh, Kazuyoshi Endo"
/identified_by="Kazuyoshi Endo"
Protein 1..3252
/product="uncharacterized protein LOC106152150"
/calculated_mol_wt=362591
Region <901..>1028
/region_name="PHA03307"
/note="transcriptional regulator ICP4; Provisional"
/db_xref="CDD:223039"
Region 2089..2140
/region_name="AWS"
/note="associated with SET domains; smart00570"
/db_xref="CDD:197795"
Region 2140..2281
/region_name="SET_SETD2"
/note="SET domain (including post-SET domain) found in SET
domain-containing protein 2 (SETD2) and similar proteins;
cd19172"
/db_xref="CDD:380949"
Site order(2151..2153,2170,2180,2184,2188,2193..2199,
2216..2220,2227..2229,2244,2255..2259,2261..2265,
2267..2271,2280)
/site_type="active"
/db_xref="CDD:380949"
Site order(2151..2153,2193..2196,2216..2220,2257,2267..2271,
2280)
/site_type="other"
/note="SAM binding site"
/db_xref="CDD:380949"
Site order(2170,2180,2184,2195..2199,2227..2229,2244,
2255..2259)
/site_type="other"
/note="polypeptide substrate binding site [polypeptide
binding]"
/db_xref="CDD:380949"
Site order(2222,2269,2271,2276)
/site_type="other"
/note="Zn binding site [ion binding]"
/db_xref="CDD:380949"
Region <2575..2757
/region_name="MDN1"
/note="Midasin, AAA ATPase with vWA domain, involved in
ribosome maturation [Translation, ribosomal structure and
biogenesis]; COG5271"
/db_xref="CDD:227596"
Region 2748..>2882
/region_name="SF-CC1"
/note="splicing factor, CC1-like family; TIGR01622"
/db_xref="CDD:273721"
Region <2837..>3062
/region_name="PRK10263"
/note="DNA translocase FtsK; Provisional"
/db_xref="CDD:236669"
Region 3088..3116
/region_name="WW"
/note="Two conserved tryptophans domain; also known as the
WWP or rsp5 domain; around 40 amino acids; functions as an
interaction module in a diverse set of signalling
proteins; binds specific proline-rich sequences but at low
affinities compared to other...; cd00201"
/db_xref="CDD:238122"
Site order(3100,3111)
/site_type="active"
/note="binding pocket [active]"
/db_xref="CDD:238122"
Region 3154..3242
/region_name="SRI"
/note="SRI (Set2 Rpb1 interacting) domain; pfam08236"
/db_xref="CDD:429880"
CDS 1..3252
/gene="LOC106152150"
/coded_by="XM_013525646.2:265..10023"
/db_xref="GeneID:106152150"
ORIGIN
1 mdfydpespt qdvdspalsp kptveegdee dishsvssta edavswrkca kdedshlmge
61 ggeenekkqi talteqvkea aevteqllkm etspplnhmv dktetghtsf deqndknssf
121 rkkthlidtq dftnddhdfp tfdstemppv ipdiqklnen atdasislns egkqqdsilc
181 phsdtsitet pssmeipipd qavsqpltqk pdeycldnip ipggqptlsp aahiplppmp
241 kpsqaespen stpragkkkk kkkkkkldie spdtvpsgvd lltllppghp qfpkfheepq
301 eqlmefhsgh sgfpggpsle skyfnpgtqr pgfkgpllpt pqphfptpme aqypgqqlpy
361 yarlpgvhnh ppypgaslpp dqqhfmpgsy ggvmpgvipq aygssvttdq tqvmmapdls
421 apqytslqtt papplppaqp kskkankipa lpspssiplp sqppppeqpp ppphppppaq
481 ssapsetked ntksvqsdit dlkedvekhn qspekaqtvt kteavapsav peapkgpksk
541 inmliqskms klnlqtekei sapplsvnsg vkpaanavkp kvlkfqiktv kklkvfedds
601 ddeeqdqkse kipikpdqdl enipaissim spimaakraa alvnkeiqsq ldvpgdkdmd
661 vttnkakhvs fkdtslqaqd eiqmvsadle asdssekprt ikveaeslpe ssfgsdinvl
721 teqvnsqkec qslstehvtp kedkeektks qspgrkrrsl spaerrksps pssgrhksps
781 pvgrnrstsp arsrrrsssp grrkrspsps sgrrspspsg grrrsrspsg rrqrstsver
841 rrrspsggrr rrspspprsr rrsprrispv rsrrrspsps rrrrspspsk srrsqspvrv
901 rrrspsptna rrrspspgds rrrspspigr rrrsppitgg qqrpssptvt htrsvtpenv
961 rkrsnspspa rgtspvssea kqispverhk splspvnrkr spspanerrr nlgsnrhrdt
1021 spertrhrdd rsryrresdr sryrddryrp rddrrrsrde ysrhdkyssr dddrrdsaks
1081 recdernknq gdllhkqhfv dqapytgene gevtgndpsg iahdmyaapy kqnepvflqn
1141 qntpqnvart viepaggfqs svrttsrssi epviekvmta lpnvpsyphf pgqyvqkvpq
1201 vtsssamgvm qiplpppapg ppipkpssil ntgtapslfl pgtvqpshsf psasssgipi
1261 trslqmevvp aalpvkvstv tsalpvgaap lvgplpdlds iplpaatstt snapqsesse
1321 ticdtntqqk sptspepvlv tsfvdkkkvv lengegeipp ppatapkkkt vtfseqndey
1381 eipppppiie deyvynqdsd ededddvppp pppppppppp rpkvvaeeee eeeeddippp
1441 pppppppppk ektnpeelsl pplsedlste evepstvwgk khdipapppp adplsssyde
1501 qevsgsqdgl twgkklptaa pqrpwspvqn pevqssqgdy digeidmdid sdsesnsapq
1561 esgidmdiss peqefhqtdl sksllqpppp pppppaptnd qpdeqptssi gkealadisl
1621 pvshlpapsa tvpqaqeptq pspfrlsfra qkqkltlsdl weddtevkkl salpkaplsp
1681 daslelerkd qddinsskta vkesvyvaeq qslsqshhsv qdistqpntv dkdigdnsei
1741 kklldkstpa evqnfkhela qrwapvtfst ppeetatenk svtednaedt ktrevigskg
1801 kkrktrwsda ievdtddsns dagtpqrrrs nrirsieeki kqekeekdrr dkeewerker
1861 erkameqirl aklekekitk gtvdeengee rptilslikq vssseardvh iplpgrkepf
1921 davsalkaed girkeemmsp nvkpksrwrw isevennevs slvnsssatq sttdsniheg
1981 ttlippppss psretasvvk qelvdgiaid ntdsssitsd ssfkvpvlkl eriendprfk
2041 dldvspskdl ekrepspekv tppvyekite nvylserkks kaskevrrmv cdcttskedr
2101 mygmaacged clnrmlmiec gsrcpcgdyc tnkrfqrfqy snvapfqtdw kgwglkaned
2161 ltkgqfvmey igevlgykqf kartkqyare ghahhyfmal nadeiidatv kgndsrfinh
2221 scdpncetqk wtvngqlrvg fftrqqipkg teltfdyqfe vygqeaqkcy cgssncrgvl
2281 gvqkkqteaq klalenkkre kkrkkelfdd illeeeierm qewhglknhk hvlelcrvmv
2341 raettsqkla llqimqetke pachrlflgy hglsllwswm adigdgslel kkqiltvlkl
2401 lpitnktvle dskvlsvvqk wavelknnee kpdgsdfgvd kdvdeecase ppsrsetpli
2461 sssshldslr lseqyksdsd dalqktpnkk rilqrvkeqd einsgsdsel sessrhstin
2521 aldisvnsti stldsslats rlsaslntlq esynstmass qdseqllgfr gvakdeekem
2581 ldaelkvlee nsdisqdqas agdeicppdq gqsqdtkkds dveqeedvpg dgpsiqdeae
2641 fesivdtvvd eenpsapapc gegdvaadee pslseeglda qktigvaeqd sssqdsiqad
2701 ttqgeqqtes tvnqeepsla dfasellesw snlkelfrip kkqeveerkq tereldqrdk
2761 eryrdrrdsy erdrdrgrdk rydkdrdsdy yrdrsrerdy drkrryddsp drdrtkrrrk
2821 tddddkprkp llptppkmsk eerrqlfeaq vraqdemtrq qeealqqeai qqamqyqyyd
2881 qygvpvtvda ngipyvqdpn iiagaapell gvdpnqqygd psaafissqy eqqtapqgaq
2941 fldsnrpvip qyleqvpmsa qpqyidptqp qviyqptqqp aqyqvqpqyi qtpsgyvqva
3001 agspapqylp qqqpvyyvsa shsgvvvqqp ygqvnqpvvs tqtglqqvpl qhplqvqpqp
3061 lqaveadiee dtlpppappp pkqklppnwk takdpegkty yyhtgtrqtq wdpptwegae
3121 qdemdlgtpt hdeprikakk ktttaaadts sevakrckea frgkmsqyiv tclnpfrrpd
3181 cklgkitntd dfkhlarklt hhimtkelkh ckhpedlevn envkskakdy ikkymskfgq
3241 iykrdpaspt ik
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