LOCUS XP_013857186 606 aa linear VRT 17-SEP-2015
DEFINITION PREDICTED: choline dehydrogenase, mitochondrial isoform X2
[Austrofundulus limnaeus].
ACCESSION XP_013857186
VERSION XP_013857186.1
DBLINK BioProject: PRJNA294420
DBSOURCE REFSEQ: accession XM_014001732.1
KEYWORDS RefSeq.
SOURCE Austrofundulus limnaeus
ORGANISM Austrofundulus limnaeus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes;
Rivulidae; Austrofundulus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_013952412.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Austrofundulus limnaeus Annotation
Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 6.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..606
/organism="Austrofundulus limnaeus"
/strain="Quisiro"
/db_xref="taxon:52670"
/chromosome="Unknown"
/sex="male"
/tissue_type="liver; brain; white muscle"
/dev_stage="adult"
/collection_date="11-Mar-2014"
/collected_by="Josiah Wagner"
Protein 1..606
/product="choline dehydrogenase, mitochondrial isoform X2"
/calculated_mol_wt=67527
Region 48..606
/region_name="PRK02106"
/note="choline dehydrogenase; Validated"
/db_xref="CDD:235000"
CDS 1..606
/gene="chdh"
/coded_by="XM_014001732.1:123..1943"
/db_xref="GeneID:106513072"
ORIGIN
1 mmlslatvgq agarrvltqt wvkfikdgrc ftasafhrys stspsanqkt psysyviiga
61 gsagcvlanr lsedahesvl lleagpkdkl lgssrlswki hmpaaltynl cddkynwfyh
121 tlpqanmdnr vlywprgrvw ggssslnamv yirghaedyn rwqregaegw dykhclpyfr
181 kaqchelgqn myrggdgplh vsrgktnhpl hkafieagqq agypftddmn gyqqegvgwm
241 dmtvykgkrw stasaylrpa lgrpnlkaev rclttkilfd grravgveym qngqkkrvfa
301 dkevilsgga inspqllmls gvgnaddlkd lgipvvqhlp gvgsnlqdhl elyvqqqctq
361 pitlykaqkp fhmikiglew lslftgygat shlesggfir srpkvahpdi qfhflpsqvi
421 dhgrvpseie ayqvhvgpmr stsigwmklk stspldhpil qpnylsteid vwefrqcvkl
481 sreifaqkaf dpfrgpefqp gpqvqsdaei dafvrqkads ayhpsctckm gspsdpmtvv
541 nsntqvlgle rlrvvdasim psvvsgnlna ptimiaekta dkirgrpalv dpevpvykpp
601 tletqr
//