GenomeNet

Database: RefSeq
Entry: XP_016265470
LinkDB: XP_016265470
Original site: XP_016265470 
LOCUS       XP_016265470             367 aa            linear   PLN 24-JUN-2016
DEFINITION  ribosome-interacting GTPase 1 [Exophiala oligosperma].
ACCESSION   XP_016265470
VERSION     XP_016265470.1
DBLINK      BioProject: PRJNA326654
            BioSample: SAMN03176945
DBSOURCE    REFSEQ: accession XM_016404465.1
KEYWORDS    RefSeq.
SOURCE      Exophiala oligosperma
  ORGANISM  Exophiala oligosperma
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales;
            Herpotrichiellaceae; Exophiala.
REFERENCE   1  (residues 1 to 367)
  AUTHORS   Cuomo,C., de Hoog,S., Gorbushina,A., Stielow,B., Teixiera,M.,
            Abouelleil,A., Chapman,S.B., Priest,M., Young,S.K., Wortman,J.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     The Genome Sequence of Exophiala oligosperma CBS72588
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 367)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUN-2016) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 367)
  AUTHORS   Cuomo,C., de Hoog,S., Gorbushina,A., Stielow,B., Teixiera,M.,
            Abouelleil,A., Chapman,S.B., Priest,M., Young,S.K., Wortman,J.,
            Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2015) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KIW45254.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Exophiala oligosperma"
                     /strain="CBS 72588"
                     /isolation_source="Tumor of sphenoidal cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:215243"
                     /chromosome="Unknown"
                     /country="Germany: Warzburg"
                     /collection_date="1988"
     Protein         1..367
                     /product="ribosome-interacting GTPase 1"
                     /calculated_mol_wt=40451
     Region          1..367
                     /region_name="Rbg1"
                     /note="Ribosome-interacting GTPase 1 [Translation,
                     ribosomal structure and biogenesis]; COG1163"
                     /db_xref="CDD:224085"
     Region          64..297
                     /region_name="DRG"
                     /note="Developmentally Regulated GTP-binding protein
                     (DRG); cd01896"
                     /db_xref="CDD:206683"
     Site            70..77
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206683"
     Site            order(73,75..78,172..173,175,200..202)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206683"
     Site            92..100
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206683"
     Site            97
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206683"
     Site            order(115..124,127..140)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206683"
     Site            116..119
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206683"
     Site            248..251
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206683"
     Site            271..273
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206683"
     Region          293..366
                     /region_name="TGS_DRG_C"
                     /note="TGS_DRG_C: DRG (developmentally regulated
                     GTP-binding protein) represents a family of GTP-binding
                     proteins that includes two members, DRG1 and DRG2. DRG1
                     and DRG2 have a C-terminal TGS domain (named after the
                     ThrRS, GTPase, and SpoT proteins where it...; cd01666"
                     /db_xref="CDD:133436"
     CDS             1..367
                     /locus_tag="PV06_03656"
                     /coded_by="XM_016404465.1:411..1514"
                     /db_xref="GeneID:27355730"
ORIGIN      
        1 mattvdkikd ieaemaktqk nkatsfhlgq lkaklaklkr elltpsssgg gggsgfdvar
       61 tgvasvgfig fpsvgkstlm srltgqhsea aayefttltt vpgqvmynga aiqmldlpgi
      121 iqgakdgkgr grqviavakt chlifivldv nkpltdkrvi enelegfgir inkeppnivf
      181 kkkdkgglni tntvplthid hdeikavmne yrinsadiai rcdatiddli dvleaksrsy
      241 ipviyalnki dsisieeldl lyripnacpi ssehgwnide llelmweklq lkrvytkpkg
      301 kqpdysapvv lrrnastved fcnqihrsil eqfkhavvyg rsvkhqpqrv glqheladed
      361 ivtiikk
//
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