GenomeNet

Database: RefSeq
Entry: XP_016433737
LinkDB: XP_016433737
Original site: XP_016433737 
LOCUS       XP_016433737            1151 aa            linear   PLN 03-MAY-2016
DEFINITION  PREDICTED: DNA ligase 4-like [Nicotiana tabacum].
ACCESSION   XP_016433737
VERSION     XP_016433737.1
DBLINK      BioProject: PRJNA319578
DBSOURCE    REFSEQ: accession XM_016578251.1
KEYWORDS    RefSeq.
SOURCE      Nicotiana tabacum (common tobacco)
  ORGANISM  Nicotiana tabacum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
            Nicotianoideae; Nicotianeae; Nicotiana.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_015869384.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Nicotiana tabacum Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Nicotiana tabacum"
                     /cultivar="TN90"
                     /db_xref="taxon:4097"
                     /chromosome="Unknown"
     Protein         1..1151
                     /product="DNA ligase 4-like"
                     /calculated_mol_wt=129905
     Region          75..585
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          652..738
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          799..892
                     /region_name="BRCT"
                     /note="C-terminal domain of the breast cancer suppressor
                     protein (BRCA1) and related domains; cl00038"
                     /db_xref="CDD:444666"
     CDS             1..1151
                     /gene="LOC107760230"
                     /coded_by="XM_016578251.1:113..3568"
                     /db_xref="GeneID:107760230"
ORIGIN      
        1 matsavdggg ssiggedikf svmvslfqwi qkskssaqkr skfrkfldaf crkpqdnfaa
       61 mrlilpgldr ergsyglkeh vlatclidal amsrdsddar rllnwrkggp ktgsnagnfs
      121 lvaaevlqrr qgmasaglti kelnefldhl assenraekt silsdlirkt naqemkwiim
      181 iilkdlklgi seksifhefh pdaedlfnvt cdlklvcekl rdrsqrhkhq dievgkavrp
      241 qlalrvsnas aawkklhgke vvveckfdgd riqihknnsd lnffsrnffd hqeyahgmsd
      301 vitqnilvnk cildgemlvw dasmnrfaef gsnqeiakaa regldsdrql cyiafdilyv
      361 gdtsvihrsl kerqeilqkv vkpikgrlei lvpngglnah rpsgkdalrf nrdegivlkd
      421 ltskwepsdr sgkwlklkpe yvragsdldv liiggyygsg rhggevaqfl vglaerpapn
      481 typrrfisfc rvgtgvsdee rntivtrlkp yfrkyeypkq apptfyqvtn nakerpdvwv
      541 espeksiivs itsdirtirt evfaapyslr fpridrvrye kpwhecldvq sfvdlvhssn
      601 gttqreadyg vgqdhepkai rssrkrgkkn vsavpshfvq tdvshikget svfsnmvfyf
      661 anvpsshtld smhkmvvehg gsfsmnlnns vthciaaenr gikfqaaklh gdvihcswlf
      721 dcclqkrllp lqpkyflfls dstkrkleae vdeycdsfys dlsvkdirkl lsdierseds
      781 ktveyykkky cpkdkwarfh gcciyffipe qclkysdcka lvelatrrmk veisvgggkv
      841 gdnlchvthv vvmslpdfdv nfsevlnsfs eaekhvlynt klhvvraswl edffkedrkl
      901 hedsyslkps nfqmsisekr hdkvrgkavk ckrasspdnh gvqikaegis eqcqaitlpk
      961 gdrkrnrlrp tgtatakakp ainmpwrvrr katnrrakih enesdesats gehlhndese
     1021 gaagtrgspe nvgehgsgiq nkdvaddlel sphgetfpqg tsecsrsrer ldeahetsye
     1081 saniasgkle dpvdpvqaml lhmipqldgk pshsvdslvk ddkpeadanp spkkkkkvsy
     1141 kdvagellkd w
//
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