LOCUS XP_016433737 1151 aa linear PLN 03-MAY-2016
DEFINITION PREDICTED: DNA ligase 4-like [Nicotiana tabacum].
ACCESSION XP_016433737
VERSION XP_016433737.1
DBLINK BioProject: PRJNA319578
DBSOURCE REFSEQ: accession XM_016578251.1
KEYWORDS RefSeq.
SOURCE Nicotiana tabacum (common tobacco)
ORGANISM Nicotiana tabacum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
Nicotianoideae; Nicotianeae; Nicotiana.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_015869384.1) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Nicotiana tabacum Annotation Release
100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1151
/organism="Nicotiana tabacum"
/cultivar="TN90"
/db_xref="taxon:4097"
/chromosome="Unknown"
Protein 1..1151
/product="DNA ligase 4-like"
/calculated_mol_wt=129905
Region 75..585
/region_name="dnl1"
/note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
/db_xref="CDD:273147"
Region 652..738
/region_name="BRCT_DNA_ligase_IV_rpt1"
/note="first BRCT domain of DNA ligase 4 (LIG4) and
similar proteins; cd17722"
/db_xref="CDD:349354"
Region 799..892
/region_name="BRCT"
/note="C-terminal domain of the breast cancer suppressor
protein (BRCA1) and related domains; cl00038"
/db_xref="CDD:444666"
CDS 1..1151
/gene="LOC107760230"
/coded_by="XM_016578251.1:113..3568"
/db_xref="GeneID:107760230"
ORIGIN
1 matsavdggg ssiggedikf svmvslfqwi qkskssaqkr skfrkfldaf crkpqdnfaa
61 mrlilpgldr ergsyglkeh vlatclidal amsrdsddar rllnwrkggp ktgsnagnfs
121 lvaaevlqrr qgmasaglti kelnefldhl assenraekt silsdlirkt naqemkwiim
181 iilkdlklgi seksifhefh pdaedlfnvt cdlklvcekl rdrsqrhkhq dievgkavrp
241 qlalrvsnas aawkklhgke vvveckfdgd riqihknnsd lnffsrnffd hqeyahgmsd
301 vitqnilvnk cildgemlvw dasmnrfaef gsnqeiakaa regldsdrql cyiafdilyv
361 gdtsvihrsl kerqeilqkv vkpikgrlei lvpngglnah rpsgkdalrf nrdegivlkd
421 ltskwepsdr sgkwlklkpe yvragsdldv liiggyygsg rhggevaqfl vglaerpapn
481 typrrfisfc rvgtgvsdee rntivtrlkp yfrkyeypkq apptfyqvtn nakerpdvwv
541 espeksiivs itsdirtirt evfaapyslr fpridrvrye kpwhecldvq sfvdlvhssn
601 gttqreadyg vgqdhepkai rssrkrgkkn vsavpshfvq tdvshikget svfsnmvfyf
661 anvpsshtld smhkmvvehg gsfsmnlnns vthciaaenr gikfqaaklh gdvihcswlf
721 dcclqkrllp lqpkyflfls dstkrkleae vdeycdsfys dlsvkdirkl lsdierseds
781 ktveyykkky cpkdkwarfh gcciyffipe qclkysdcka lvelatrrmk veisvgggkv
841 gdnlchvthv vvmslpdfdv nfsevlnsfs eaekhvlynt klhvvraswl edffkedrkl
901 hedsyslkps nfqmsisekr hdkvrgkavk ckrasspdnh gvqikaegis eqcqaitlpk
961 gdrkrnrlrp tgtatakakp ainmpwrvrr katnrrakih enesdesats gehlhndese
1021 gaagtrgspe nvgehgsgiq nkdvaddlel sphgetfpqg tsecsrsrer ldeahetsye
1081 saniasgkle dpvdpvqaml lhmipqldgk pshsvdslvk ddkpeadanp spkkkkkvsy
1141 kdvagellkd w
//
DBGET integrated database retrieval system