LOCUS XP_016709848 301 aa linear PLN 25-APR-2021
DEFINITION homeobox-leucine zipper protein HAT3 isoform X1 [Gossypium
hirsutum].
ACCESSION XP_016709848
VERSION XP_016709848.1
DBLINK BioProject: PRJNA713846
DBSOURCE REFSEQ: accession XM_016854359.2
KEYWORDS RefSeq.
SOURCE Gossypium hirsutum (cotton)
ORGANISM Gossypium hirsutum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
Gossypium.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_053447.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gossypium hirsutum Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..301
/organism="Gossypium hirsutum"
/isolate="1008001.06"
/db_xref="taxon:3635"
/chromosome="D11"
Protein 1..301
/product="homeobox-leucine zipper protein HAT3 isoform X1"
/calculated_mol_wt=33047
Region 7..108
/region_name="HD-ZIP_N"
/note="HD-ZIP protein N-terminus; pfam04618"
/db_xref="CDD:428039"
Site order(139..142,144,161,167,180,182..183,186..187,189..191,
193..194)
/site_type="DNA binding"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:238039"
Site order(140,143,183,186..187,190)
/site_type="other"
/note="specific DNA base contacts [nucleotide binding]"
/db_xref="CDD:238039"
Region 143..193
/region_name="Homeobox"
/note="Homeobox domain; pfam00046"
/db_xref="CDD:425441"
Region 195..237
/region_name="HALZ"
/note="homeobox associated leucin zipper; smart00340"
/db_xref="CDD:128634"
CDS 1..301
/gene="LOC107924083"
/coded_by="XM_016854359.2:262..1167"
/db_xref="GeneID:107924083"
ORIGIN
1 mgdkddglgl slslgcarnq pslklnlmpl aspcmqnlqq rniwnelfqs svfvidrmha
61 dgqletrsva ggidvnqapa laeceeedgv sspnstvssi ggkrnerdpv cdeteaerps
121 csrssddedg ggagddasrk klrlskeqsl vleetfkehs tlnpkqklal amqlnlrprq
181 vevwfqnrra rtklkqtevd ceylkrccdn lteenrrlqk evqelralkl spqlythinp
241 pttltmcpsc ervavassss sslaassapn skhqrpvpas swaalplpvt hrpfnapasr
301 p
//