GenomeNet

Database: RefSeq
Entry: XP_016709848
LinkDB: XP_016709848
Original site: XP_016709848 
LOCUS       XP_016709848             301 aa            linear   PLN 25-APR-2021
DEFINITION  homeobox-leucine zipper protein HAT3 isoform X1 [Gossypium
            hirsutum].
ACCESSION   XP_016709848
VERSION     XP_016709848.1
DBLINK      BioProject: PRJNA713846
DBSOURCE    REFSEQ: accession XM_016854359.2
KEYWORDS    RefSeq.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053447.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gossypium hirsutum Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Gossypium hirsutum"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="D11"
     Protein         1..301
                     /product="homeobox-leucine zipper protein HAT3 isoform X1"
                     /calculated_mol_wt=33047
     Region          7..108
                     /region_name="HD-ZIP_N"
                     /note="HD-ZIP protein N-terminus; pfam04618"
                     /db_xref="CDD:428039"
     Site            order(139..142,144,161,167,180,182..183,186..187,189..191,
                     193..194)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(140,143,183,186..187,190)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          143..193
                     /region_name="Homeobox"
                     /note="Homeobox domain; pfam00046"
                     /db_xref="CDD:425441"
     Region          195..237
                     /region_name="HALZ"
                     /note="homeobox associated leucin zipper; smart00340"
                     /db_xref="CDD:128634"
     CDS             1..301
                     /gene="LOC107924083"
                     /coded_by="XM_016854359.2:262..1167"
                     /db_xref="GeneID:107924083"
ORIGIN      
        1 mgdkddglgl slslgcarnq pslklnlmpl aspcmqnlqq rniwnelfqs svfvidrmha
       61 dgqletrsva ggidvnqapa laeceeedgv sspnstvssi ggkrnerdpv cdeteaerps
      121 csrssddedg ggagddasrk klrlskeqsl vleetfkehs tlnpkqklal amqlnlrprq
      181 vevwfqnrra rtklkqtevd ceylkrccdn lteenrrlqk evqelralkl spqlythinp
      241 pttltmcpsc ervavassss sslaassapn skhqrpvpas swaalplpvt hrpfnapasr
      301 p
//
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