LOCUS XP_016856778 775 aa linear PRI 05-OCT-2023
DEFINITION aryl hydrocarbon receptor nuclear translocator isoform X2 [Homo
sapiens].
ACCESSION XP_016856778
VERSION XP_016856778.1
DBLINK BioProject: PRJNA168
DBSOURCE REFSEQ: accession XM_017001289.2
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_000001.11) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_000001405.40-RS_2023_10
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Best-placed RefSeq; Gnomon;
RefSeqFE; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 10/02/2023
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..775
/organism="Homo sapiens"
/db_xref="taxon:9606"
/chromosome="1"
Protein 1..775
/product="aryl hydrocarbon receptor nuclear translocator
isoform X2"
/calculated_mol_wt=85165
Region 77..141
/region_name="bHLH-PAS_ARNT"
/note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
domain found in aryl hydrocarbon receptor nuclear
translocator (ARNT) and similar proteins; cd18947"
/db_xref="CDD:381517"
Site order(81..82,85..86,89,92..93,97,118..119)
/site_type="DNA binding"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:381517"
Site order(96,99,102..103,120,123..124,127,129..131,133)
/site_type="other"
/note="dimer interface [polypeptide binding]"
/db_xref="CDD:381517"
Region 154..260
/region_name="PAS"
/note="PAS fold; pfam00989"
/db_xref="CDD:395786"
Region 348..448
/region_name="PAS_11"
/note="PAS domain; pfam14598"
/db_xref="CDD:434060"
CDS 1..775
/gene="ARNT"
/gene_synonym="ARNT1; bHLHe2; HIF-1-beta; HIF-1beta;
HIF1-beta; HIF1B; HIF1BETA; TANGO"
/coded_by="XM_017001289.2:95..2422"
/db_xref="GeneID:405"
/db_xref="HGNC:HGNC:700"
/db_xref="MIM:126110"
ORIGIN
1 mtsdvpslgp aiasgnsgpg iqgggaivqr aikrrpgldf dddgegnskf lrcdddqmsn
61 dkerfarsdd eqssadkerl arenhseier rrrnkmtayi telsdmvptc salarkpdkl
121 tilrmavshm kslrgtgnts tdgsykpsfl tdqelkhlil eaadgflfiv scetgrvvyv
181 sdsvtpvlnq pqsewfgstl ydqvhpddvd klreqlstse naltgrildl ktgtvkkegq
241 qssmrmcmgs rrsficrmrc gsssvdpvsv nrlsfvrnrc rnglgsvkdg ephfvvvhct
301 gyikawppad ddpeagqgsk fclvaigrlq vtsspnctdm snvcqptefi srhniegift
361 fvdhrcvatv gyqpqellgk nivefchped qqllrdsfqq vvklkgqvls vmfrfrsknq
421 ewlwmrtssf tfqnpysdei eyiictntnv knssqeprpt lsntiqrpql gptanlplem
481 gsgqlaprqq qqqteldmvp grdglasynh sqvvqpvttt gpehskplek sdglfaqdrd
541 prfseiyhni nadqskgiss stvpatqqlf sqgntfpptp rpaenfrnsg lappvtivqp
601 sasagqmlaq isrhsnptqg atptwtpttr sgfsaqqvat qataktrtsq fgvgsfqtps
661 sfssmslpga ptaspgaaay psltnrgsnf apetgqtagq fqtrtaegvg vwpqwqgqqp
721 hhrsssseqh vqqppaqqpg qpevfqemls mlgdqsnsyn neefpdltmf ppfse
//