LOCUS XP_017242777 1093 aa linear PLN 27-JUN-2016
DEFINITION PREDICTED: uncharacterized protein LOC108214994 isoform X2 [Daucus
carota subsp. sativus].
ACCESSION XP_017242777
VERSION XP_017242777.1
DBLINK BioProject: PRJNA326436
DBSOURCE REFSEQ: accession XM_017387288.1
KEYWORDS RefSeq.
SOURCE Daucus carota subsp. sativus
ORGANISM Daucus carota subsp. sativus
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae;
Scandiceae; Daucinae; Daucus; Daucus sect. Daucus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_030383.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Daucus carota subsp. sativus
Annotation Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1093
/organism="Daucus carota subsp. sativus"
/cultivar="DH1"
/sub_species="sativus"
/db_xref="taxon:79200"
/chromosome="3"
/tissue_type="leaf"
/dev_stage="vegetative"
/country="Netherlands"
/genotype="Doubled haploid"
Protein 1..1093
/product="uncharacterized protein LOC108214994 isoform X2"
/calculated_mol_wt=121862
Region 31..172
/region_name="CBM_4_9"
/note="Carbohydrate binding domain; pfam02018"
/db_xref="CDD:396553"
Region 205..346
/region_name="CBM_4_9"
/note="Carbohydrate binding domain; pfam02018"
/db_xref="CDD:396553"
Region 376..516
/region_name="CBM_4_9"
/note="Carbohydrate binding domain; pfam02018"
/db_xref="CDD:396553"
Region 547..689
/region_name="CBM_4_9"
/note="Carbohydrate binding domain; pfam02018"
/db_xref="CDD:396553"
Region 785..1030
/region_name="Glyco_10"
/note="Glycosyl hydrolase family 10; smart00633"
/db_xref="CDD:214750"
CDS 1..1093
/gene="LOC108214994"
/coded_by="XM_017387288.1:67..3348"
/db_xref="GeneID:108214994"
ORIGIN
1 maypstsnan dvshseefke gskksrdnla anlilnhdfs ngldswhpnc cegyvasnsg
61 ypqnisaspg nyyavitnrk ecwqgleqdi ttrvspglty tvsatvsvsg plqdiadvsa
121 tlrleyrnaa tsylfiarts vskdgwekle gtfllsdmpd qvvlyfegps pgvdlliksv
181 svfspsefrk feegvktswk nlvdniiknh dfsggldswh pnccegyvas atldysgets
241 drsrnyyavi tnrkecwqgl eqditsgvsp gstylvsaiv svsgnlqdfa dvsatlrlmh
301 qdkttsylfv artsvfkdkw enlegtfslp dtlervvlyf egpsagvdll iksvvvsgpt
361 fseirtgsie yvsggkeitl npefddgiqc wsgrgckivl hnsmvdgkil pasgkcfasa
421 rertatwhgi eqditarvcr klayevsatv rifgnnvsna dvratlfvqt sdrreeyigi
481 anaqatdkdw vqlrgkflln gffskvviyl egpppgtdil lnnfvvqrae rrppllakvs
541 ervdyganim tnsnlgngtn gwfplgnctl stgigspntf ppmaratlgp ceplsgrfii
601 vsnrtqtwmg paqiitdkie lyrtyqvsaw vrigsnaagp qnvnvavgvd sqwvnggqve
661 indqrwhevc gsfrietkpt kvmvyvqgpv agvdlmvagm hifpvnrhar frhlkdqtdk
721 irkhdvvlkf srsdsvstqg ipvkvrqvhn sfpfgscvsr snidnedfvd ffkqhfnwav
781 fgnelkwywt eseqgkinyk daddllnfca shnietrghc ifwevedtvq pwiralnenn
841 lmaavqnrlt slltrykgkf rhydvnneml hgsffedrlg kdirtnmfkk anqldpsaml
901 fvndyhvedg cdsksspeky iqqildlqeq gapvggigiq ghidypvgsi vcsaldklai
961 lglpiwftel dvsssnehvr addlevmlre afahpavdgv mlwgfwelfm crdhshlvna
1021 egeineagkr ylalkqewms naqghideqg qfgfrgfygt yevevdishs kkkiikpfvv
1081 ekgesplvls idl
//
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