GenomeNet

Database: RefSeq
Entry: XP_644935
LinkDB: XP_644935
Original site: XP_644935 
LOCUS       XP_644935                205 aa            linear   INV 29-JAN-2010
DEFINITION  Ras GTPase [Dictyostelium discoideum AX4].
ACCESSION   XP_644935
VERSION     XP_644935.1
DBSOURCE    REFSEQ: accession XM_639843.1
KEYWORDS    RefSeq.
SOURCE      Dictyostelium discoideum AX4
  ORGANISM  Dictyostelium discoideum AX4
            Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Eichinger,L., Pachebat,J.A., Glockner,G., Rajandream,M.A.,
            Sucgang,R., Berriman,M., Song,J., Olsen,R., Szafranski,K., Xu,Q.,
            Tunggal,B., Kummerfeld,S., Madera,M., Konfortov,B.A., Rivero,F.,
            Bankier,A.T., Lehmann,R., Hamlin,N., Davies,R., Gaudet,P., Fey,P.,
            Pilcher,K., Chen,G., Saunders,D., Sodergren,E., Davis,P.,
            Kerhornou,A., Nie,X., Hall,N., Anjard,C., Hemphill,L., Bason,N.,
            Farbrother,P., Desany,B., Just,E., Morio,T., Rost,R., Churcher,C.,
            Cooper,J., Haydock,S., van Driessche,N., Cronin,A., Goodhead,I.,
            Muzny,D., Mourier,T., Pain,A., Lu,M., Harper,D., Lindsay,R.,
            Hauser,H., James,K., Quiles,M., Madan Babu,M., Saito,T.,
            Buchrieser,C., Wardroper,A., Felder,M., Thangavelu,M., Johnson,D.,
            Knights,A., Loulseged,H., Mungall,K., Oliver,K., Price,C.,
            Quail,M.A., Urushihara,H., Hernandez,J., Rabbinowitsch,E.,
            Steffen,D., Sanders,M., Ma,J., Kohara,Y., Sharp,S., Simmonds,M.,
            Spiegler,S., Tivey,A., Sugano,S., White,B., Walker,D., Woodward,J.,
            Winckler,T., Tanaka,Y., Shaulsky,G., Schleicher,M., Weinstock,G.,
            Rosenthal,A., Cox,E.C., Chisholm,R.L., Gibbs,R., Loomis,W.F.,
            Platzer,M., Kay,R.R., Williams,J., Dear,P.H., Noegel,A.A.,
            Barrell,B. and Kuspa,A.
  TITLE     The genome of the social amoeba Dictyostelium discoideum
  JOURNAL   Nature 435 (7038), 43-57 (2005)
   PUBMED   15875012
REFERENCE   2  (residues 1 to 205)
  AUTHORS   Glockner,G., Eichinger,L., Szafranski,K., Pachebat,J.A.,
            Bankier,A.T., Dear,P.H., Lehmann,R., Baumgart,C., Parra,G.,
            Abril,J.F., Guigo,R., Kumpf,K., Tunggal,B., Cox,E., Quail,M.A.,
            Platzer,M., Rosenthal,A. and Noegel,A.A.
  CONSRTM   Dictyostelium Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 2 of Dictyostelium discoideum
  JOURNAL   Nature 418 (6893), 79-85 (2002)
   PUBMED   12097910
REFERENCE   3  (residues 1 to 205)
  AUTHORS   Eichinger,L., Pachebat,J.A., Gloeckner,G., Rajandream,M.-A.,
            Sucgang,R., Song,J., Cox,E.C., Tunggal,B., Szafranski,K.,
            Konfortov,B.A., Farbrother,P., Bankier,A.T., Lehmann,R., Hamlin,N.,
            Xu,Q., Davies,R., Gaudet,P., Fey,P., Pilcher,K., Chen,G.,
            Saunders,D., Sodergren,E., Davis,P., Nie,X., Kerhornou,A.,
            Hemphill,L., Bason,N., Berriman,M., Desany,B., Churcher,C.,
            Cooper,J., van Driessche,N., Cronin,A., Goodhead,I., Muzny,D.,
            Hall,N., Harper,D., Lindsay,R., Hauser,H., James,K., Quiles,M.,
            Buchrieser,C., Wardroper,A., Thangavelu,M., Johnson,D., Knights,A.,
            Loulseged,H., Mungall,K., Price,C., Ma,J., Quail,M., Hernandez,J.,
            Rabbinowitsch,E., Steffen,D., Sanders,M., Weinstock,G., Sharp,S.,
            Just,E., Shaulsky,G., Simmonds,M., Tivey,A., White,B., Walker,D.,
            Woodward,J., Winckler,T., Schleicher,M., Rosenthal,A., Rivero,F.,
            Chisholm,R.L., Gibbs,R., Loomis,W.F., Platzer,M., Kay,R.R.,
            Williams,J., Dear,P.H., Noegel,A.A., Barrell,B. and Kuspa,A.
  CONSRTM   The Dictyostelium discoideum Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (12-AUG-2009) dictyBase, Center for Genetic Medicine,
            Northwestern University, 303 E Chicago Ave, Chicago, IL 60611, USA
REFERENCE   4  (residues 1 to 205)
  AUTHORS   Eichinger,L., Pachebat,J.A., Gloeckner,G., Rajandream,M.-A.,
            Sucgang,R., Song,J., Cox,E.C., Tunggal,B., Szafranski,K.,
            Konfortov,B.A., Farbrother,P., Bankier,A.T., Lehmann,R., Hamlin,N.,
            Xu,Q., Davies,R., Gaudet,P., Fey,P., Pilcher,K., Chen,G.,
            Saunders,D., Sodergren,E., Davis,P., Nie,X., Kerhornou,A.,
            Hemphill,L., Bason,N., Berriman,M., Desany,B., Churcher,C.,
            Cooper,J., van Driessche,N., Cronin,A., Goodhead,I., Muzny,D.,
            Hall,N., Harper,D., Lindsay,R., Hauser,H., James,K., Quiles,M.,
            Buchrieser,C., Wardroper,A., Thangavelu,M., Johnson,D., Knights,A.,
            Loulseged,H., Mungall,K., Price,C., Ma,J., Quail,M., Hernandez,J.,
            Rabbinowitsch,E., Steffen,D., Sanders,M., Weinstock,G., Sharp,S.,
            Just,E., Shaulsky,G., Simmonds,M., Tivey,A., White,B., Walker,D.,
            Woodward,J., Winckler,T., Schleicher,M., Rosenthal,A., Rivero,F.,
            Chisholm,R.L., Gibbs,R., Loomis,W.F., Platzer,M., Kay,R.R.,
            Williams,J., Dear,P.H., Noegel,A.A., Barrell,B. and Kuspa,A.
  CONSRTM   The Dictyostelium discoideum Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2004) dictyBase, Center for Genetic Medicine,
            Northwestern University, 303 E Chicago Ave, Chicago, IL 60611, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EAL71066.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Dictyostelium discoideum AX4"
                     /strain="AX4"
                     /db_xref="taxon:352472"
                     /chromosome="2"
                     /note="terminal gaps represent complex repetitive
                     elements"
     Protein         1..205
                     /product="Ras GTPase"
                     /calculated_mol_wt=22859
     Region          25..185
                     /region_name="small_GTPase"
                     /note="Small GTPase of the Ras superfamily; ill-defined
                     subfamily; smart00010"
                     /db_xref="CDD:197466"
     Region          25..184
                     /region_name="Ras"
                     /note="Rat sarcoma (Ras) family of small guanosine
                     triphosphatases (GTPases); cd00876"
                     /db_xref="CDD:206642"
     Site            29..36
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206642"
     Site            order(30..31,78..79,87,90,105,107,110..111,114..115,118)
                     /site_type="other"
                     /note="GDI interaction site"
                     /db_xref="CDD:206642"
     Site            order(31..37,51,54,79,135..136,138..139,166..167)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206642"
     Site            order(36..37,51,53,59..60,73..74,76,78..79,86,88..90,92,
                     121,168)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206642"
     Site            order(52..55,57..59)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206642"
     Site            54
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206642"
     Site            order(55,57..60)
                     /site_type="other"
                     /note="effector interaction site"
                     /db_xref="CDD:206642"
     Site            76..79
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206642"
     Site            order(78..79,95..96)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206642"
     Site            135..138
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206642"
     Site            166..168
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206642"
     CDS             1..205
                     /gene="rapB"
                     /locus_tag="DDB_G0272857"
                     /old_locus_tag="DDB_0202711"
                     /old_locus_tag="DDB_0229437"
                     /old_locus_tag="DDBDRAFT_0202711"
                     /old_locus_tag="DDBDRAFT_0229437"
                     /coded_by="XM_639843.1:1..618"
                     /db_xref="dictyBase:DDB0229437"
                     /db_xref="dictyBase:DDB_G0272857"
                     /db_xref="GeneID:8618614"
ORIGIN      
        1 mgkgngkskd skgseksstk tkffvavmga gsvgksaltv qftqgvfidk ydptvedtyt
       61 ktfeldgeqv cievldtags evlvamrely mknaegfilv ysilvkstfl eikdiveqlf
      121 rvkeeeevpi vlvgnkidld ahrevstneg kqlansypnc dfweasskdr invdnvffsi
      181 vkrikekykk egapvkekke kciim
//
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