LOCUS XP_646012 1043 aa linear INV 29-JAN-2010
DEFINITION MYND-type zinc finger-containing protein [Dictyostelium discoideum
AX4].
ACCESSION XP_646012
VERSION XP_646012.1
DBSOURCE REFSEQ: accession XM_640920.1
KEYWORDS RefSeq.
SOURCE Dictyostelium discoideum AX4
ORGANISM Dictyostelium discoideum AX4
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia;
Dictyosteliales; Dictyosteliaceae; Dictyostelium.
REFERENCE 1 (residues 1 to 1043)
AUTHORS Eichinger,L., Pachebat,J.A., Glockner,G., Rajandream,M.A.,
Sucgang,R., Berriman,M., Song,J., Olsen,R., Szafranski,K., Xu,Q.,
Tunggal,B., Kummerfeld,S., Madera,M., Konfortov,B.A., Rivero,F.,
Bankier,A.T., Lehmann,R., Hamlin,N., Davies,R., Gaudet,P., Fey,P.,
Pilcher,K., Chen,G., Saunders,D., Sodergren,E., Davis,P.,
Kerhornou,A., Nie,X., Hall,N., Anjard,C., Hemphill,L., Bason,N.,
Farbrother,P., Desany,B., Just,E., Morio,T., Rost,R., Churcher,C.,
Cooper,J., Haydock,S., van Driessche,N., Cronin,A., Goodhead,I.,
Muzny,D., Mourier,T., Pain,A., Lu,M., Harper,D., Lindsay,R.,
Hauser,H., James,K., Quiles,M., Madan Babu,M., Saito,T.,
Buchrieser,C., Wardroper,A., Felder,M., Thangavelu,M., Johnson,D.,
Knights,A., Loulseged,H., Mungall,K., Oliver,K., Price,C.,
Quail,M.A., Urushihara,H., Hernandez,J., Rabbinowitsch,E.,
Steffen,D., Sanders,M., Ma,J., Kohara,Y., Sharp,S., Simmonds,M.,
Spiegler,S., Tivey,A., Sugano,S., White,B., Walker,D., Woodward,J.,
Winckler,T., Tanaka,Y., Shaulsky,G., Schleicher,M., Weinstock,G.,
Rosenthal,A., Cox,E.C., Chisholm,R.L., Gibbs,R., Loomis,W.F.,
Platzer,M., Kay,R.R., Williams,J., Dear,P.H., Noegel,A.A.,
Barrell,B. and Kuspa,A.
TITLE The genome of the social amoeba Dictyostelium discoideum
JOURNAL Nature 435 (7038), 43-57 (2005)
PUBMED 15875012
REFERENCE 2 (residues 1 to 1043)
AUTHORS Eichinger,L., Pachebat,J.A., Gloeckner,G., Rajandream,M.-A.,
Sucgang,R., Song,J., Cox,E.C., Tunggal,B., Szafranski,K.,
Konfortov,B.A., Farbrother,P., Bankier,A.T., Lehmann,R., Hamlin,N.,
Xu,Q., Davies,R., Gaudet,P., Fey,P., Pilcher,K., Chen,G.,
Saunders,D., Sodergren,E., Davis,P., Nie,X., Kerhornou,A.,
Hemphill,L., Bason,N., Berriman,M., Desany,B., Churcher,C.,
Cooper,J., van Driessche,N., Cronin,A., Goodhead,I., Muzny,D.,
Hall,N., Harper,D., Lindsay,R., Hauser,H., James,K., Quiles,M.,
Buchrieser,C., Wardroper,A., Thangavelu,M., Johnson,D., Knights,A.,
Loulseged,H., Mungall,K., Price,C., Ma,J., Quail,M., Hernandez,J.,
Rabbinowitsch,E., Steffen,D., Sanders,M., Weinstock,G., Sharp,S.,
Just,E., Shaulsky,G., Simmonds,M., Tivey,A., White,B., Walker,D.,
Woodward,J., Winckler,T., Schleicher,M., Rosenthal,A., Rivero,F.,
Chisholm,R.L., Gibbs,R., Loomis,W.F., Platzer,M., Kay,R.R.,
Williams,J., Dear,P.H., Noegel,A.A., Barrell,B. and Kuspa,A.
CONSRTM The Dictyostelium discoideum Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2006) dictyBase, Center for Genetic Medicine,
Northwestern University, 303 E Chicago Ave, Chicago, IL 60611, USA
REFERENCE 3 (residues 1 to 1043)
AUTHORS Eichinger,L., Pachebat,J.A., Gloeckner,G., Rajandream,M.-A.,
Sucgang,R., Song,J., Cox,E.C., Tunggal,B., Szafranski,K.,
Konfortov,B.A., Farbrother,P., Bankier,A.T., Lehmann,R., Hamlin,N.,
Xu,Q., Davies,R., Gaudet,P., Fey,P., Pilcher,K., Chen,G.,
Saunders,D., Sodergren,E., Davis,P., Nie,X., Kerhornou,A.,
Hemphill,L., Bason,N., Berriman,M., Desany,B., Churcher,C.,
Cooper,J., van Driessche,N., Cronin,A., Goodhead,I., Muzny,D.,
Hall,N., Harper,D., Lindsay,R., Hauser,H., James,K., Quiles,M.,
Buchrieser,C., Wardroper,A., Thangavelu,M., Johnson,D., Knights,A.,
Loulseged,H., Mungall,K., Price,C., Ma,J., Quail,M., Hernandez,J.,
Rabbinowitsch,E., Steffen,D., Sanders,M., Weinstock,G., Sharp,S.,
Just,E., Shaulsky,G., Simmonds,M., Tivey,A., White,B., Walker,D.,
Woodward,J., Winckler,T., Schleicher,M., Rosenthal,A., Rivero,F.,
Chisholm,R.L., Gibbs,R., Loomis,W.F., Platzer,M., Kay,R.R.,
Williams,J., Dear,P.H., Noegel,A.A., Barrell,B. and Kuspa,A.
CONSRTM The Dictyostelium discoideum Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (08-OCT-2004) dictyBase, Center for Genetic Medicine,
Northwestern University, 303 E Chicago Ave, Chicago, IL 60611, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to EAL72098.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..1043
/organism="Dictyostelium discoideum AX4"
/strain="AX4"
/db_xref="taxon:352472"
/chromosome="1"
/note="terminal gaps represent complex repetitive
elements"
Protein 1..1043
/product="MYND-type zinc finger-containing protein"
/note="RhoGAP domain-containing protein"
/calculated_mol_wt=113521
Region 71..107
/region_name="zf-MYND"
/note="MYND finger; pfam01753"
/db_xref="CDD:426410"
Region 872..1016
/region_name="RhoGAP"
/note="GTPase-activator protein (GAP) for Rho-like
GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
Small GTPases (G proteins) cluster into distinct families,
and all act as molecular switches, active in their
GTP-bound form but inactive when bound to...; cd00159"
/db_xref="CDD:238090"
Site order(894,931,935,1007,1010..1011)
/site_type="other"
/note="GTPase interaction site"
/db_xref="CDD:238090"
Site 894
/site_type="active"
/note="catalytic residue [active]"
/db_xref="CDD:238090"
CDS 1..1043
/gene="gacZ"
/locus_tag="DDB_G0269496"
/old_locus_tag="DDB_0190304"
/old_locus_tag="DDB_0233848"
/old_locus_tag="DDBDRAFT_0190304"
/old_locus_tag="DDBDRAFT_0233848"
/coded_by="XM_640920.1:1..3132"
/db_xref="dictyBase:DDB0233848"
/db_xref="dictyBase:DDB_G0269496"
/db_xref="GeneID:8616960"
ORIGIN
1 mtttntsifg prvnnskfnn nnnnnnnnnn nnnntsnnnn sniikppqvv qetqqqqqaq
61 qqplqtneev cvicksknvq vctgclmvyy cgaehqnidw pnhkslcsgl nrrndlldra
121 ekskdlrkkl qsdifssgnr vsnsnnnssi ysnstgninn nnnsnnnnik ggigggavtn
181 sstvmaperk siaisnikhl qqqiqqtqqt qqqpppttts iptqpnsssf nkptakkpgt
241 sfkssssgdn tpinqspsss ssslvsstnn nnnnnnnnnn nnninsnsnn msgssggika
301 lqnqlqnsin nkpsnttsns pnpsppsstf vpnsnnnsns nsssgsgksn lnislkssts
361 sspvtstyly nnnnsnsnsn snnsstettt cissnsnnss niensdntne engmkniknk
421 lsqinfgapp psfkkptskv ienednnnsn ndgtlkqsss sdsiyfnnnn nnnnnnnnnn
481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn snnnnfdinn snniinnkqs
541 tcssidglsy nnnnsgsslk nsvppttsnt pprkrssggs sssnnsnigs ngnrigfike
601 hkknqslpds fvdfyqsnkn qsngyeslld nddnktrgyg sfnenddshe ecdddddddd
661 gggqdgddgl dgtefkrgrn rptglrtnnn avfewesgti eystnntsqh kklgvgsrgg
721 nsfskdtqsq stnstttddh qtgsilnsns gssddlqqqq tqtqqqqsql sagvgriagk
781 frmiggdikk kaaivgtltk nkvsevtsks ksstsvnnnn ndevdhnenn nnnnnninnn
841 nnnnnnnien iifgipleea vkksatlhpl ipdviyksie yirekgiqee gifrlsgsan
901 aitllknefd rgvnvdlyqq ldqhvvsgil klylrqipet lftqdfgeel eelrvggnss
961 daiskriags iillqrlpes nrcilhylcn llnaisfeps tkmgtvnlai vfaptlgvsv
1021 evmtclisyy deifgiqtyn yns
//
