GenomeNet

Database: RefSeq
Entry: YP_002352675
LinkDB: YP_002352675
Original site: YP_002352675 
LOCUS       YP_002352675             582 aa            linear   CON 03-AUG-2016
DEFINITION  ATP-dependent DNA ligase I [Dictyoglomus turgidum DSM 6724].
ACCESSION   YP_002352675
VERSION     YP_002352675.1
DBLINK      BioProject: PRJNA59177
            Assembly: GCF_000021645.1
DBSOURCE    REFSEQ: accession NC_011661.1
KEYWORDS    RefSeq.
SOURCE      Dictyoglomus turgidum DSM 6724
  ORGANISM  Dictyoglomus turgidum DSM 6724
            Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae;
            Dictyoglomus.
REFERENCE   1  (residues 1 to 582)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H.,
            Bruce,D., Goodwin,L., Pitluck,S., Sims,D., Brettin,T., Detter,J.C.,
            Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N.
            and Mead,D.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Dictyoglomus turgidum DSM 6724
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 582)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 582)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H.,
            Bruce,D., Goodwin,L., Pitluck,S., Sims,D., Brettin,T., Detter,J.C.,
            Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N.
            and Mead,D.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2008) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from ACK42061.
            RefSeq Category: Reference Genome
                        TYS: Designated Type Strain
                        UPR: UniProt Genome
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Dictyoglomus turgidum DSM 6724"
                     /strain="DSM 6724"
                     /db_xref="taxon:515635"
     Protein         1..582
                     /product="ATP-dependent DNA ligase I"
                     /EC_number="6.5.1.1"
                     /calculated_mol_wt=66478
     Region          1..577
                     /region_name="CDC9"
                     /note="ATP-dependent DNA ligase [Replication,
                     recombination and repair]; cl25417"
                     /db_xref="CDD:330238"
     CDS             1..582
                     /locus_tag="Dtur_0780"
                     /coded_by="NC_011661.1:794120..795868"
                     /inference="protein motif:TFAM:TIGR00574"
                     /note="KEGG: dth:DICTH_0616 thermostable DNA ligase;
                     TIGRFAM: DNA ligase I, ATP-dependent Dnl1;
                     PFAM: DNA ligase domain protein; ATP dependent DNA ligase
                     domain protein; ATP dependent DNA ligase"
                     /transl_table=11
                     /db_xref="InterPro:IPR000977"
                     /db_xref="InterPro:IPR012308"
                     /db_xref="InterPro:IPR012309"
                     /db_xref="InterPro:IPR012310"
                     /db_xref="InterPro:IPR016059"
                     /db_xref="GeneID:7082068"
CONTIG      join(WP_012583146.1:1..582)
ORIGIN      
        1 mlfgelaqyf ekiekttkrn emmeiladlf krvdkeeiek iiyllngrva pdyekiefgm
       61 seklvlrama lalkvpifdl ekvykevgdl geliikysqn egkdltvvet fntlfeianl
      121 sgegsvdakv nrlaflinsl tpqggkylvr ivlgklrlgv geptvmdals fakvkdkslr
      181 pfierafnit sdlgyvakvf weggiealkk ikvevgkpir malaervskv eeivkrlgkc
      241 aiepkfdgfr cqihkkennv rifsrnledn thmfpdlvea vlkqfsdknv iiegeaisyn
      301 petgefypfq vtvqrkrkyn isemvelypl qlfafdilyl ngeditslpy irrrqkleea
      361 isegekifvt kniitndpke iqaffeecit eglegivakr ldapyqagir nfnwiklkrs
      421 yqghladtvd cvilgyfkgr ghrakfgiga llvgvydder dlfktvakig tgpteeewvr
      481 frevldeikl eskpnnvesl iepdvwvepk yvvviqadei trspvhtcgr eldglgyalr
      541 fprvigfvre dkgpydattv keilemfrgq kkekveedsd nl
//
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