GenomeNet

Database: RefSeq
Entry: YP_099810
LinkDB: YP_099810
Original site: YP_099810 
LOCUS       YP_099810                205 aa            linear   CON 27-JUL-2017
DEFINITION  superoxide dismutase [Bacteroides fragilis YCH46].
ACCESSION   YP_099810
VERSION     YP_099810.1
DBLINK      BioProject: PRJNA58195
            Assembly: GCF_000009925.1
DBSOURCE    REFSEQ: accession NC_006347.1
KEYWORDS    RefSeq.
SOURCE      Bacteroides fragilis YCH46
  ORGANISM  Bacteroides fragilis YCH46
            Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1
  AUTHORS   Kuwahara,T., Yamashita,A., Hirakawa,H., Nakayama,H., Toh,H.,
            Okada,N., Kuhara,S., Hattori,M., Hayashi,T. and Ohnishi,Y.
  TITLE     Genomic analysis of Bacteroides fragilis reveals extensive DNA
            inversions regulating cell surface adaptation
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (41), 14919-14924 (2004)
   PUBMED   15466707
REFERENCE   2  (residues 1 to 205)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 205)
  AUTHORS   Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-APR-2004) Contact:Masahira Hattori Graduate School of
            Frontier Sciences, University of Tokyo; 5-1-5 Kashiwanoha, Kashiwa,
            Chiba 277-8561, Japan
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to BAD49276.
            RefSeq Category: Reference Genome
                        COM: Community Selected
            This work was done in collaboration with Tomomi Kuwahara, Haruyuki
            Nakayama, Natsumi Okada, Yoshinari Ohnishi (University of
            Tokushima), Hideki Hirakawa, Satoru Kuhara (Kyushu University),
            Tetsuya Hayashi (Miyazaki Medical College), and supported by the
            Research for the Future Program of the Japan Society for the
            Promotion of Science.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Bacteroides fragilis YCH46"
                     /strain="YCH46"
                     /db_xref="taxon:295405"
     Protein         1..205
                     /product="superoxide dismutase"
                     /calculated_mol_wt=23007
     Region          13..205
                     /region_name="SodA"
                     /note="Superoxide dismutase [Inorganic ion transport and
                     metabolism]; COG0605"
                     /db_xref="CDD:223678"
     CDS             1..205
                     /locus_tag="BF2527"
                     /coded_by="NC_006347.1:2908703..2909320"
                     /note="similar to gp:BNRSOD2_1 [Bacteroides fragilis],
                     percent identity 100 in 193 aa, BLASTP E(): 1e-111"
                     /transl_table=11
                     /db_xref="GeneID:3083785"
CONTIG      join(WP_005788037.1:1..205)
ORIGIN      
        1 mntllmslif ttmtyempkl pyannalepv isqqtidyhy gkhlqtyvnn lnslvpgtey
       61 egktveaiva sapdgaifnn agqvlnhtly flqfapkpak nepagklgea ikrdfgsfen
      121 fkkefnaasv glfgsgwawl svdkdgklhi tkepngsnpv raglkpllgf dvwehayyld
      181 yqnrradhvn klweiidwdv vekrl
//
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