KEGG   Cupriavidus necator H16: H16_A0954
Entry
H16_A0954         CDS       T00416                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
reh  Cupriavidus necator H16
Pathway
reh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:reh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    H16_A0954 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:reh03021]
    H16_A0954 (rpoZ)
   03400 DNA repair and recombination proteins [BR:reh03400]
    H16_A0954 (rpoZ)
Enzymes [BR:reh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     H16_A0954 (rpoZ)
Transcription machinery [BR:reh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     H16_A0954 (rpoZ)
DNA repair and recombination proteins [BR:reh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      H16_A0954 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: CAJ92099
UniProt: Q0KD22
Position
1:1048172..1048375
AA seq 67 aa
MARITVEDCLKHIPNRFELALAATYRARQLVQGHTPKVEAKDKPTVVALREIASGQVGIE
MLKKVPT
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcgcgtattaccgtcgaagattgtctgaaacacattccgaatcgcttcgagctcgcg
ctggcggccacgtatcgtgcccgtcagctggtgcagggccacacgcccaaagtcgaagca
aaggacaagccgaccgtggtggcactgcgcgagatcgcgtcgggccaggtcggcatcgag
atgctgaagaaggtcccgacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system