KEGG   Cupriavidus necator H16: H16_B0768
Entry
H16_B0768         CDS       T00416                                 
Symbol
h16_B0768
Name
(GenBank) Exconuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
reh  Cupriavidus necator H16
Pathway
reh03030  DNA replication
reh03430  Mismatch repair
reh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:reh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H16_B0768 (h16_B0768)
   03430 Mismatch repair
    H16_B0768 (h16_B0768)
   03440 Homologous recombination
    H16_B0768 (h16_B0768)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:reh03032]
    H16_B0768 (h16_B0768)
   03400 DNA repair and recombination proteins [BR:reh03400]
    H16_B0768 (h16_B0768)
Enzymes [BR:reh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H16_B0768 (h16_B0768)
DNA replication proteins [BR:reh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H16_B0768 (h16_B0768)
DNA repair and recombination proteins [BR:reh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H16_B0768 (h16_B0768)
SSDB
Motif
Pfam: RNase_T GIY-YIG Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: CAJ95565
UniProt: Q0K359
Position
2:complement(865546..867132)
AA seq 528 aa
MPTYLPSRLPADGARLLDAQALAAALSRPIVFVDLETTGADAQRDRITEIGVVEVGPDGI
IEWDTLLDPGMSIPPFIQRMTGITEEMVRGQPSFESLAESLAERLQGRLFVAHNARFDYG
FLKNAFRRAGVTFRADVLCTVRLSRSLFPSVERHGLDALIARFGLTPKGRHRALADAELL
WQFWQKIHATYSVDLVESAVRTLVRRASLPAGLDETALEDVPAAPGVYIFYGDQDVPLYI
GKSVHLRQRIGAHFSGDYRYGKDMRLARLVRRVEWRETGGETGALLLEARLVKAMQPVHN
QLLRRNARLYAWELPQQLPVPRLRSDRDTDFCRHRDLFGVFGSRGAAEARLRALAQEHGL
CLATLSLEKTTRRGSPCFARQVHRCAGACVGAEPSGAHRARLAAALAPIALMPWPFDGPA
AWREQHDGRTWWHVADDWCYLGCAATLEEAQALAAAPAHFDLDTYQILAPRLAQWMPQAV
PLSVHRPFTLTAPEAPARAPRPARIPAGQTARKAPPAAAQQPLGLVSD
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgcctacctacctgccgtcgcgcctgccagcggacggggcgcgcctgctcgacgcccaa
gctctcgccgcggcgctgtcgcgccctattgtctttgtcgacctggagaccaccggcgcg
gacgcccagcgcgaccgcattaccgagatcggcgtggtcgaagtcggcccggacggcatc
attgaatgggacaccctgctcgaccccggcatgtcgatcccgccgttcatccagcgcatg
actggcattaccgaagagatggtgcgcggccagccgagcttcgagtcactggcggaatcg
cttgccgaacgcctgcaaggccgcttgttcgtggcgcacaacgcgcgcttcgactatggc
ttcctgaagaacgccttccgacgtgccggcgtgaccttccgggccgacgtgctgtgcacg
gtaaggctgtcgcgctcgctgttcccctccgtggaacgccacggcctggatgcgctgatc
gcgcgcttcggcctgacgcccaagggccgccaccgcgccctggccgatgccgagctgctg
tggcagttctggcagaagatccatgccacgtattcggtcgacctggtggaatcggccgtg
cgcacgctggtgcggcgggccagcctgccggccggcctggacgaaaccgcgctggaagac
gtgccggcggcgcccggtgtctatatcttctatggcgaccaggacgtgccactctatatc
ggcaagagcgtgcacctgcggcaacggatcggcgcccacttctccggcgactaccggtac
ggcaaggatatgcggctggcccggctggtacgccgtgtggaatggcgcgagaccggcggc
gagaccggcgcgctgctgctcgaagcccggctggtcaaggcgatgcagccggtgcacaac
cagctgctgcgccgcaatgcccggctctatgcctgggaactgccgcagcagctgccggtg
ccacgcctgcgctcggatcgagatacggatttctgccggcatcgcgacctgttcggcgtg
ttcggcagccgcggcgcggccgaggctcgcttgcgcgcgctggcgcaggaacacggcctg
tgcctggccacgctgtcgctggagaaaaccacccgccgtggcagcccctgctttgcgcgc
caggtccatcgctgcgccggtgcctgcgtcggcgccgagccgtcgggcgcgcaccgcgcc
cggctggccgccgcgctggcgccgatcgcgctgatgccctggcccttcgatggcccggct
gcctggcgcgagcagcacgacggacgcacctggtggcatgtcgccgacgactggtgctac
ctgggctgcgcagccacgctggaagaagcgcaggcgttggcggcagcaccagcgcatttc
gacctcgatacataccagatcctcgcgccgcggctggcgcaatggatgccgcaggcggtg
ccgctgtccgtgcacaggccgttcacgctgaccgcccccgaggcccccgcccgggcgcca
cgcccggcacgcatcccggccggacagactgcccgcaaggcgccaccggctgccgcacag
caacccctgggcctggtctccgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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