KEGG   Rhizobium etli bv. mimosae Mim1: REMIM1_CH04197
Entry
REMIM1_CH04197    CDS       T02778                                 
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rel  Rhizobium etli bv. mimosae Mim1
Pathway
rel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    REMIM1_CH04197 (rppH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rel03019]
    REMIM1_CH04197 (rppH)
Messenger RNA biogenesis [BR:rel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     REMIM1_CH04197 (rppH)
SSDB
Motif
Pfam: NUDIX
Other DBs
NCBI-ProteinID: AGS23905
UniProt: S5S295
Position
4226329..4226862
AA seq 177 aa
MSQATVKAEDLPYRPCVGVMILNRDGLVWAGRRIPDGNSEYDGSPQLWQMPQGGIDKGEN
PLDAAYRELYEETGIRTVTLLAEASNWINYDLPPSLIGIGLKGKFRGQTQRWFAFRFEGD
ESEIAINPPPGGHDPEFDAWEWKPMQELPGLIVPFKRAVYDQVIAEFRHLAALQSED
NT seq 534 nt   +upstreamnt  +downstreamnt
atgagccaggcgaccgtgaaagccgaggatctgccctatcgcccatgcgtcggcgtgatg
atcctgaaccgcgatggcctggtctgggccggccgacgcattcccgacggcaattccgaa
tatgacggctcgccgcagctctggcagatgccccaggggggcatcgacaagggcgagaat
cccctggatgccgcctaccgcgagctctatgaagaaaccggcatcagaacggtgacgctg
ctcgccgaagcaagcaattggatcaattacgatctgccgccgtcgctgatcggcatcggg
ctgaaagggaaatttcgcggccagacgcagcgctggttcgccttccgcttcgagggcgac
gagagcgagatcgccatcaatccgccgcccggcggccacgatcccgaattcgatgcctgg
gaatggaagccgatgcaggagctgccgggcctgattgtcccctttaagcgcgccgtctat
gaccaggtgatagccgaattccggcatttggcggcgctgcaatcggaagactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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