KEGG   Candidatus Ruthia endofausta: HUE58_03220
Entry
HUE58_03220       CDS       T06701                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
reo  Candidatus Ruthia endofausta
Brite
KEGG Orthology (KO) [BR:reo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:reo03032]
    HUE58_03220
   03036 Chromosome and associated proteins [BR:reo03036]
    HUE58_03220
   03400 DNA repair and recombination proteins [BR:reo03400]
    HUE58_03220
DNA replication proteins [BR:reo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HUE58_03220
Chromosome and associated proteins [BR:reo03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HUE58_03220
DNA repair and recombination proteins [BR:reo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HUE58_03220
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_bac_1 HU-CCDC81_euk_1 HU-DNA_bdg
Other DBs
NCBI-ProteinID: QKQ24166
UniProt: A0A6N0HPD0
Position
complement(593734..594009)
AA seq 91 aa
MNKSDLVAAIAQTSNLTKADAARALDAMTGAITSALATGDNVAITGFGSFVVRDRAARTG
RNPQTGEAIQIKASKVPAFKAGKLLKESVNS
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaataaatcagatttagttgcagcaattgcacaaacttccaacttaacaaaagcagat
gcagctcgtgcattggatgcaatgacaggcgcaattacctcagcattagccactggtgat
aatgtagccattacaggttttggcagttttgttgtccgtgatcgtgcagcacgtactggt
cgcaatcctcaaacgggcgaagcaatccaaattaaggcctctaaagtgcctgcatttaaa
gcaggtaaattacttaaagaatcggttaattcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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