KEGG T03667: IE4803

Rhizobium etli bv. phaseoli IE4803: IE4803_CH00025

Entry

IE4803_CH00025    CDS       T03667

Name

(GenBank) double-strand break repair helicase AddA type protein

K16898

ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]

Organism

rep Rhizobium etli bv. phaseoli IE4803

Brite

KEGG Orthology (KO) [BR:rep00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rep03400]
    IE4803_CH00025
Enzymes [BR:rep01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IE4803_CH00025
DNA repair and recombination proteins [BR:rep03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     IE4803_CH00025

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C UvrD_C_2 AAA_19 PDDEXK_1 AAA_30 DEAD

Other DBs

NCBI-ProteinID:

AJC77301

Position

complement(21380..24931)

AA seq 1183 aa
MSERSDLPDNDDPGAWIGWTTIQQAIASDPVRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDDDLSRRIIEIEGTAPDRIKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGGALAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFTAAAEQQGGVDMVLRKRLG
LAADDTERGIAAQYWPLPELSGGTLQLYLSLADQKGGAKAQEVAYGLRLADREPDDARRA
AMLEKIFLTAKGEPKTDAQFLVKAMLAEAPKLAEAIATARAHVAASRDRLKLMRMHGATQ
AALVLADRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDEIFRTSDNGRGLSAVGEPVVHRSSRIGHP
GAVDLWEMVAPEAVVKEEDWTAPFDATPESAPAAILARRIAHSIGALVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLTLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEEDIFAAAALRGDNESVWSHLKKFAADGNERFRMAVEKLELF
LRQSKTLPVHDFYARLLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFV
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
DPDEPPMPAWVPVADLSNSLTQNDAARIQILAEEEYRRLLYVAMTRAADRLVVCGYRGVR
ANNDTWHMMISTALSEGHPHVEAASFSDPDGEWQGIRWRVPRVERSFERIIRSEARDDEI
SLPEGLLRPLPPQAELPRPLSPSGAGTIIDEDEGGLVVASPLFSEKQRSDRSLEKGRLLH
RMLQALPDIPPEERPGAAQRYGERAARFWPEAERRKLVDSVLKLLDEKDLQPVLGEQARP
EVSIMGTLTLDGRRYAVSGRIDRLAVLTDRVVILDYKTNRVPPASEDAIPFAHRAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSERALGLALAGLKTK

NT seq 3552 nt +upstreamnt +downstreamnt
atgagtgagcggagcgaccttcctgataatgacgatccgggggcctggatcggctggacc
acgatccaacaggcgatcgcctccgatccggtgcgctcggcatgggtttcggccaatgcc
ggttccggcaagacgcatgtcctgacccagcgcgtcatccggcttctgctcgccggcgcg
cggccttcggccattctctgcctcacctataccaaggccgcggcttcggaaatgtcgaac
cgcgtcttcgaacggctggccgactgggtcgtgcttgacgatgacgatctcagccggcgg
atcattgagatcgaaggtacggcgcccgatcggataaaactggccgaggcccggcggttg
tttgccaaggcgctggagacaccgggcggcttgaagatccagacgatccacgccttttgc
gaggcgctgctgcatcagttcccactggaggccaatgtcgctgggcatttttcggttctc
gacgaccgcgccgccgcggcgctgctttccgatgcgcgccgggcgctgctgacggcgact
gcacctgaagaaggcggcgcccttgcagaggctttcgcctacgttctcaatctcggcgac
gaatccggcctggagaacctgctcggcgacattgtcgccaaccgcaacgccatccgccgc
tttaccgcggccgccgaacagcagggcggcgtggacatggttctgcgcaaaaggttgggg
ctcgccgccgatgacaccgagagaggcatcgcggcgcagtactggccgctgccggaactt
tcaggcggtacgctgcaactttatctgtcgctggccgatcaaaagggcggcgccaaagcg
caggaggttgcctatggcctcaggctcgccgaccgggagccggatgacgccagacgcgct
gcgatgctcgagaaaattttcctgacggccaagggcgagccgaaaacggacgcgcagttc
ctggtcaaggccatgcttgccgaggcgccgaaattggcggaggccattgccaccgcccgc
gctcatgtcgcggcaagccgcgaccggctgaaactgatgcggatgcacggggccacgcag
gccgcgctcgtgctcgccgaccggctgaatcacgattacgaggaactgaagaaacagcgc
agccaactcgatttcgaggacctgatcacccgcaccgccgacctgctgacaaagagcggc
gtcggtccctggatccattacaagctcgaccggggtatcgatcatatcctcgtcgacgag
gcgcaggataccagcccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagcgcccggccgatcgtgcgcacgctgtttgccgtcggcgacgagaagcag
tcgatctattcctttcagggggcgcggcccgagcgtttttcggaggagagcgaccggacg
cggcggcgcgtctccgacagcggacagagcttttcttccgtgcggctgccgctctccttc
cgctcgactgccgacgtgctcgaggccgtcgacgagattttcaggacatccgacaatggg
cgcggcctcagcgctgtcggcgagccggtcgtgcatcgttccagccgcatcggacatccc
ggcgccgtcgacctctgggaaatggttgcgccggaagcggtggtgaaggaagaggattgg
acggcgcccttcgatgcgacgccggaaagcgcgccggccgcaattctcgcgcggcggatc
gctcattcgatcggcgcgctcgtcggccgtgaaacgatcgtcgacaagggcaaggagcga
ctgatcgaggccggcgatattcttgtgctggtgcgcaagcgcgacgccttcgtcaatgcc
ttgacccgcgccttgaagcgtcgcggcgacattcccgtcgccggcgccgacaggctcacc
ctgaccagccatatcgccgtgcaggatctgctcgcactcggccgcttcctgcttctgccg
gaagatgacctttcgctcgccgccgtgctcaagagcccgcttttcgatctgtccgaggag
gacatctttgcggccgcagcgctgcggggcgacaatgagagcgtttggagccatctcaag
aaattcgccgccgacggcaacgagcgtttccgcatggcggtcgaaaagctggaactgttc
ctccgacaatcgaaaaccctaccggtgcatgatttctatgcgcgcctgctgggcagtcac
ggcggacggcggcagtttcttgcccgcctcggcaccgaagtcagcgatatcctcgacgaa
ttcctgaccttcaccctcgaccatgagagctccggccttcccgggctgcaatccttcgtc
tcgacgctcgagctcgaagcgcccgaggtgaagcgcgagcaggacaagggacgcaacgag
gtcaggatcatgaccgtgcatgcctcaaagggtcttgaggcacccatcgttttcctggtc
gacggtggctccaaagccttcacgcatacgcatctgcccaagcttcgcctgatcgaaacc
gacccggatgagccgccgatgcccgcctgggttcccgtcgccgacctctccaattcgctg
acgcagaacgatgccgcgcgaatccagatactggccgaagaggagtatcgccggctgctc
tatgtcgccatgacgcgggccgccgaccggctggtcgtctgcggctatcgtggcgtgcgc
gcgaacaacgacacctggcatatgatgatttccaccgcgctcagcgaaggtcatccgcat
gtggaggcagccagcttctccgaccccgacggggaatggcagggcatcagatggcgcgtg
ccgcgggtggagcggagcttcgagcgtatcatccgcagtgaggcgcgcgacgacgaaatt
agcctgccggaaggcctgttgcggccattgccgccacaggcggaactgcctcggcccctc
agcccttccggcgccgggacgatcatcgacgaagacgaaggcggcctggttgtcgcctcg
ccgctcttttcagagaagcaacgcagcgatcgctcgctggagaaaggcaggctgctgcat
cgcatgctgcaggcgcttcccgatattccgccggaggagcggcccggtgccgcacagcgt
tacggcgaacgggcggcccgtttctggccggaggccgaacggcgcaagctggtcgattcg
gttctgaaactattggacgagaaagacttgcagcccgtcctcggcgagcaggcccggccc
gaggtctcgatcatggggacattgaccctcgacggcagacgctatgccgtctccggccgc
atcgataggctggcggtgcttaccgatcgcgtcgtcattctcgattacaaaaccaatcgc
gtgccgccggcgtccgaagacgccatcccctttgcacaccgggcgcagctggcgatctat
cgcgagatcctggcaccgctctatcccggcaagcgcatcgactgcatgctcgtctatacc
gagaacgcctccctctacacgctgagcgaaagggcgctcggtttggcgcttgcaggactg
aagacaaagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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