KEGG   Rhizobium etli bv. phaseoli IE4803: IE4803_PC00618
Entry
IE4803_PC00618    CDS       T03667                                 
Name
(GenBank) type VI secretion system IcmF family protein
  KO
K11891  type VI secretion system protein ImpL
Organism
rep  Rhizobium etli bv. phaseoli IE4803
Pathway
rep03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rep00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IE4803_PC00618
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rep02044]
    IE4803_PC00618
Secretion system [BR:rep02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IE4803_PC00618
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Fig1
Other DBs
NCBI-ProteinID: AJC83163
Position
pRetIE4803c:660299..663826
AA seq 1175 aa
MAIFRFLWAVLTSRWLWTFIGLILLSLIVWIFGPIVSVGDSAPFASEIVRLIIIGLLFLV
FIIWWVAARRRAVRANRLFVSEIAPQPEAPPSPAEEGVAAVGVKFREVMAGLKRQKVGGR
KFLREMPWYVIIGPPATGKTTALRQSGLSFPIDLTDDLHGVGGTRNCDWFFTEEAVLIDT
AGRYVQQESQPEVDAAEWLGFLDLLKKHRGRRALNGVIVALGIDTLSEDDAAIRMHGRQI
RKRLAELQERIGIRLPVYLMLTKADLIKGFESFFGALSTADREQVWGVTFPPGARIEGSE
VTGEFSALAGVLERRLIPRLEGEENLTARAEIFRFPAQVESLSEPVRVLIETVFGESKYA
ESAWLRGIYLTSATQEGTAIDRLTAALASSFGLPAQPAAPMFRAEKRSFFLKDLLTKVIF
REAGLGTFDPAAEDRRIWIWRGAAVAATGFVVIAGLLFTISYRKNDAALAAQAEQLEALQ
LPLTPVAARQAPVDPLDIDLALEAATEVANARTDQPGGIASLIGPSAETEILQAQSGAYH
RTLRNILEPRMVALLEATMWRQIRDPEFQLGALKTYRMMTGLSPMDTDFAKQWWTEKLPE
SAPVPPFKTDMAVDHQLAAIDNMATEQAFVAPDEALVGEALRTICSIPLPVRAYSALLSD
PEVTALKEWIPADHVGPNGLKVLARRSDKTLRVGISGAFTYDGFHNVILTRLEDVATQAA
LDRSVFAGGCSESASPSVATLSQDILKLYYDDYIAKWDSFMRDVRLAPLADLQTASENLK
DLSSADSSMKRLLTAIVRETELTRADDGGGQAPPPGASKLLSKLGKIGKLAAKGVKIMPK
AGSKSDVDLSGALVAEHFKPIKAAIVEVDGQPPALNDAVAALTALSNMLQTVSASPDAQD
AMKRQGGLAELTGAVAKQAVTLPDPLDDWLAGLAGNTSALATGAVTSELNAIWRADVLPF
CQAALTNRYPFVPDSAIDVNVVDFQRVFGPGGLIDSFINNNLVNYIDTTSHPWKWRSDIK
LDPRPLAALEQARLIRDSLFPGGAGPILTFTLEPKDLSPTVSRVTLNVDGQSLSYFNNPT
RPQPMTWPGKDGTGVITLAFQPLDGSPEVMVSETGSWAFLRMLRAGRLSGTNLAELFKLR
LAAQGYYADFELRAASVANPFDLKMFARFSCPTQL
NT seq 3528 nt   +upstreamnt  +downstreamnt
atggcgatcttccggttcctctgggctgttctcacctctcgctggctctggaccttcatc
gggctaattttgctgtccctcatcgtctggatattcggccctattgtcagtgtcggagac
agtgcgccgtttgcttccgagatcgtgcgactgatcatcatcggccttttgttcctcgtg
ttcatcatctggtgggttgcggcgcggcggcgcgcggtgcgcgccaaccgcctcttcgtt
tccgagattgctcctcagcctgaggctccgccaagtccggctgaagagggcgttgccgcc
gtcggagtgaaattccgggaggtgatggcgggtctcaaacgccagaaggtcggcggccga
aagtttctccgcgaaatgccgtggtatgtcatcatcggcccgcctgccaccggcaagaca
acagccctgcggcaatccggattgagcttcccgatcgatctgaccgacgaccttcacggc
gttggcggcacgcgcaattgcgattggttctttaccgaggaggcggtgctgatcgatacg
gccggtcgctacgttcagcaggagagccagccggaggtcgatgcagcggaatggctgggc
ttcctcgatctcttgaaaaagcacaggggccgtcgtgcgttgaatggggtgatcgtagcg
ctcggcatcgacacgctgtcggaagacgatgcggcgatccggatgcatggcaggcagatc
cgcaaacgcctggccgagcttcaggagcgcatcgggatccgcttgcccgtctatctcatg
ctgacgaaagcggacctgataaagggcttcgaaagcttcttcggggcgctctcgacggcc
gatcgtgaacaggtgtggggcgtgaccttcccgccaggcgcccgcatcgagggcagcgaa
gtcaccggtgagttctcggctttggcgggcgtgctcgaacgacgtctcattccgcgtcta
gaaggcgaagagaacctgaccgcccgggcggaaatatttcgattcccagctcaggtagaa
agcctttcagaacctgttcgtgtgctgatcgagaccgtcttcggcgaaagcaaatatgcg
gaaagcgcctggttgcggggtatttatctgacctccgccactcaggaaggtacggcaatc
gaccggctgacggcagcattggcatcatccttcggcctgcctgcccaacccgctgcaccg
atgtttagggccgaaaagcgcagcttcttcctcaaagacctgctgacgaaggtcattttc
agggaggctggcctcggcactttcgatccggcggcagaggatcggcgtatctggatctgg
cgcggtgccgccgtggcagcaacaggattcgtggtcattgccggcctgttattcacgata
tcctatcggaagaacgacgccgccctggcggcgcaggccgaacagctcgaggccctacag
cttcccctgacgccggttgcggcacgccaagcgccggtggatcccctcgacattgatttg
gcgctcgaagccgccacggaagtagcgaatgcacggacagaccagccaggcggaatagcc
tccttgataggtccttccgctgaaaccgaaattctccaggcgcaatcgggcgcctaccac
cgcaccctgcgcaatatattggaaccacgcatggtcgcgctgctcgaggcgacgatgtgg
cggcagatccgcgatcccgagttccagttgggggcactgaaaacctatcgcatgatgacc
ggcctgtcgccgatggacacggacttcgccaaacaatggtggacggagaaattgcctgaa
tcggcgcccgtgccacctttcaagaccgacatggcagtagatcatcagcttgctgcgatc
gacaatatggcaacggaacaggccttcgtcgctcctgacgaagcgctggtgggcgaagcg
ctacgcacgatctgctcgatcccgctgccggtgcgcgcctatagcgcgctgctctccgat
ccggaggtcacggcgctgaaggaatggatcccggcagatcatgtcggcccgaacggcctg
aaggttctcgcgcggcgctccgacaagacgctgagggtcggcatcagcggtgccttcacc
tatgacggattccacaacgtgatcctgacccggcttgaagacgtcgcaacgcaggccgcg
ctggaccgctcggtttttgccggcggatgctccgagagcgccagcccatcggttgccaca
ctctcgcaagatatcctcaagctctactatgacgactatatcgccaagtgggacagcttc
atgcgtgacgtcaggcttgcgccactggccgacctgcagacggccagcgaaaacctcaag
gatctctccagcgccgattcctcaatgaagcgtctgctgaccgccatcgtgcgcgagacg
gaactgacccgtgccgatgacggcggcggccaggctcctccgccaggagcatccaagctt
ttgtccaagcttggcaagatcggcaaactcgccgccaagggcgtgaagataatgcccaaa
gccggctccaaatcggatgtcgatctttcgggcgcgctggtcgccgagcatttcaaaccc
atcaaggcggccattgtcgaggtcgatggccagcctcccgcactcaatgatgcagtcgca
gccttgaccgcgctgtcgaacatgcttcagaccgtgtcggcaagccccgatgcgcaggat
gcaatgaaaagacagggcggcctggcggagctgaccggcgcagtggcgaaacaagccgtg
acccttcccgatccgctggacgactggctggccggactggccggcaataccagcgcgctg
gcaacaggggcggttacttctgagctcaacgccatctggcgtgccgacgtgcttcccttc
tgccaggcggcgctcaccaatcgctatccgttcgtccccgacagcgcaatcgatgtcaat
gtcgttgatttccagcgcgtcttcggtcccggcgggctgatcgacagctttatcaataat
aatctggtcaactacatcgacacgaccagccacccctggaaatggcgctccgacatcaag
ctcgatcccaggcctctggcggcgctggagcaggcgcggctgatccgcgacagtctcttt
ccgggaggcgcggggccgatcctgaccttcacgctcgagccgaaagatctttcgccgaca
gtcagccgcgtgaccttgaatgtcgacggtcagagtctctcttacttcaacaacccgacg
cgcccgcagccgatgacctggcccggcaaggatggaaccggcgtgatcaccctcgccttc
cagcccctcgacggttcgccggaagtgatggtcagcgagactggaagctgggcgtttctg
cggatgctgcgcgccggtcggctgagcgggaccaatcttgccgagctcttcaagctgcgc
cttgctgcccagggctactacgccgatttcgagcttcgcgcggcaagtgtcgccaacccc
tttgatttgaagatgtttgcgaggttctcgtgcccgacgcagctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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