KEGG   Prescottella equi: REQ_20540
Entry
REQ_20540         CDS       T01352                                 
Name
(GenBank) putative RNase D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
req  Prescottella equi
Brite
KEGG Orthology (KO) [BR:req00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:req03016]
    REQ_20540
Enzymes [BR:req01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     REQ_20540
Transfer RNA biogenesis [BR:req03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    REQ_20540
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: CBH48112
UniProt: A0A3S5Y6C4
Position
complement(2165961..2167298)
AA seq 445 aa
MVLVTRPALRRNPVGHASADVEIVPAHVEFWPMPDSTEPTTPVPLLVPADGVPPVIETAA
GVRDAAERLAAGTGPLAVDAERASGFRYSSRAYLVQLRRAGAGSFLLDPIPTAEDLEPLR
DAINGLEWVLHSADQDLPCLAELGLEPAALFDTELAGRLAGFERVGLAAIVERTLGLELR
KGHGAADWSTRPLPDAWLNYAALDVEVLLELREAMATELAAQGKTEWAAQEFEHVRLAGP
PQPKPDRWRRTSQIHSLKSPRQLAAVRELWTTRDEIARKRDISPSRILPDSAIVTAASAD
PKSIDTLRALPVFGGPRQRRSSRIWLGALERARALPQNELPPVNQPFTGPPPPSRWAKRD
PDAAARLATAKTGIAELSERVGVPVENLLSPDLVRRVCWEPPATPTTPDAEAAAAVDAAL
AAGGARPWQRDLMVPILVEALRAQA
NT seq 1338 nt   +upstreamnt  +downstreamnt
gtggtcttggtcacacgtccagctttgcgtcgaaatccggtcggacacgcgtccgccgac
gtggaaatcgttcctgcccacgtagagttctggcctatgccagacagcaccgagcccacc
acacccgtgcccctgctggttccggccgacggtgtgccaccggtgatcgagaccgctgcc
ggggtccgcgacgcggccgaacgtctcgcggccggcacgggcccgctggccgtcgacgcc
gagcgcgcctccggcttccgttactcgtcgcgcgcctacctcgtgcagctgcggcgggcg
ggggccggatcgttcctgctcgacccgattccgaccgcggaggacctcgaaccgctgcgc
gacgcgatcaacggcctcgaatgggttctgcactccgccgaccaggacctgccgtgcctg
gccgaactcggcctcgaaccggccgccctgttcgacaccgaactggccggacgcctggcc
ggtttcgagcgcgtcggactggccgcgatcgtcgaacgcaccctgggcctcgaacttcgc
aagggccacggcgccgccgactggtcgacccgcccactgcccgatgcgtggctcaattac
gcggccctcgacgtcgaggtactcctggaactgcgggaggcgatggcgacggaactcgcc
gcacagggcaagactgaatgggccgcacaggaattcgagcatgtccggctggccggaccg
cctcaacccaagccggaccgctggcgccggacgtcacagatccacagcctcaagagcccg
cgccagctcgccgcggtccgggaactgtggaccacccgcgacgagatcgcgcgcaaacgc
gacatctcccccagccgcatcctgccggactcggcaatcgtcaccgccgcgagcgccgac
cccaagagcatcgacacactgcgggccttgccggtgttcggcgggccccgccagcgcagg
tcgtcacgcatctggctgggcgcgctcgagcgtgctcgcgccctgccccagaacgaactg
cccccggtcaaccagccgttcaccggaccgccgccaccgagtcgctgggccaagcgcgat
cccgacgccgcggcgcgactggccacggcgaagaccgggatcgccgaactgagcgaacgc
gttggggtacccgtcgagaacctgctgagcccggacctcgttcgccgcgtctgctgggag
ccgccggccacccccacgacgccggacgccgaagccgcggccgccgtcgacgccgcgctc
gctgcgggcggcgcccgcccgtggcagcgcgatctgatggtgccgatcctggtcgaggcc
ctccgcgcacaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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