KEGG   Rhodococcus erythropolis PR4: RER_52910Help
Entry
RER_52910         CDS       T00881                                 

Gene name
pcaF
Definition
(GenBank) putative beta-ketoadipyl-CoA thiolase
  KO
K00626  acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Organism
rer  Rhodococcus erythropolis PR4
Pathway
rer00071  Fatty acid degradation
rer00072  Synthesis and degradation of ketone bodies
rer00280  Valine, leucine and isoleucine degradation
rer00310  Lysine degradation
rer00362  Benzoate degradation
rer00380  Tryptophan metabolism
rer00620  Pyruvate metabolism
rer00630  Glyoxylate and dicarboxylate metabolism
rer00640  Propanoate metabolism
rer00650  Butanoate metabolism
rer00900  Terpenoid backbone biosynthesis
rer01100  Metabolic pathways
rer01110  Biosynthesis of secondary metabolites
rer01120  Microbial metabolism in diverse environments
rer01130  Biosynthesis of antibiotics
rer01200  Carbon metabolism
rer01212  Fatty acid metabolism
rer02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rer00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00620 Pyruvate metabolism
    RER_52910 (pcaF)
   00630 Glyoxylate and dicarboxylate metabolism
    RER_52910 (pcaF)
   00640 Propanoate metabolism
    RER_52910 (pcaF)
   00650 Butanoate metabolism
    RER_52910 (pcaF)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    RER_52910 (pcaF)
   00072 Synthesis and degradation of ketone bodies
    RER_52910 (pcaF)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    RER_52910 (pcaF)
   00310 Lysine degradation
    RER_52910 (pcaF)
   00380 Tryptophan metabolism
    RER_52910 (pcaF)
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    RER_52910 (pcaF)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    RER_52910 (pcaF)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RER_52910 (pcaF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rer04147]
    RER_52910 (pcaF)
Enzymes [BR:rer01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.9  acetyl-CoA C-acetyltransferase
     RER_52910 (pcaF)
Exosome [BR:rer04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   RER_52910 (pcaF)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Thiolase_N Thiolase_C ketoacyl-synt Death
Motif
Other DBs
NCBI-ProteinID: BAH35999
NITE: RER_52910
UniProt: C0ZS07
Position
5752250..5753461
Genome map
AA seq 403 aa AA seqDB search
MPDVVICEPLRTPVGRFGGVFRDVAPEDLASTLIAELVTRTGISGAEIDDVILGQASPNG
EAPAIGRIAALNAGLGVDVPGMQVDRRCGSGLQAIIQAVMQVQSGGSDLVLAGGAESMSQ
AEFYATGMRWGVKGEGVALSDRLARARVTAGGRDFPVPGGMIETAENLRAEFSISREDQD
ALAVQSHQRAVAAQKNGVFAEEIVPVSAPQRKGEALLVDTDEHPRADTSMESLARLRPMR
AKIDPDSTVTAGNASGQNDGAALAIVTTADKARALGLRPLARLASWSVAGVPPRTMGIGP
VPASEKALGRLGLTLADMDVIELNEAFAAQALAVLQSWKLEADDPRVNPNGSGISLGHPV
GATGGRILATLLREMDRREARYGLETMCIGGGQGLAAVFERLS
NT seq 1212 nt NT seq  +upstreamnt  +downstreamnt
atgcctgacgttgtcatctgtgaaccgctccgtacccctgtcggccgcttcggcggtgtc
ttccgtgacgtagccccggaagatctcgcctcgacgttgatcgccgaactcgtcacgcgt
accggcatttccggcgcggagatcgacgacgtcattctcggccaggcttcgccgaacggt
gaagctccggcgatcggacgcatcgcggcgctcaacgccggtctgggcgtcgatgttccc
ggcatgcaggtggatcgccggtgcgggtcgggattgcaggcaatcatccaggccgtcatg
caggttcagtccggtggcagtgatctggtcctcgcgggtggtgccgagtcgatgagccag
gctgagttctacgcaaccggaatgcgttggggtgtcaagggtgaaggtgttgcgctcagc
gatcgtctcgcgcgcgcccgcgtgacagccggcggacgcgacttcccggttcccggcgga
atgatcgaaacggcagagaacctgcgcgccgagttctccatcagccgcgaagatcaggac
gcactcgcggtgcagtcgcatcagcgtgccgttgctgcacagaagaacggcgtcttcgcc
gaggaaatcgttccggtatccgctccgcagcgcaagggcgaggccctgctcgtcgacacc
gacgagcatccgcgggccgacacttcgatggaatcgcttgcacgccttcgtcccatgcgc
gcaaagatcgacccggactccaccgtgacggcaggtaatgccagcggccagaacgacggc
gcagcgctggcgatcgtcaccaccgcagacaaagcccgcgcactcggactgcgacccctc
gcacgcctggcaagttggagcgttgccggagttcccccgcgcaccatgggcatcggtccc
gtcccggcgtcggagaaggcactcggccgcctcggattgaccttggcggacatggatgtc
atcgaactcaacgaagcctttgcggcacaagcacttgcagtcctgcagagttggaagctc
gaagccgacgacccgcgcgtcaaccccaacggctccggcatctccctcggccatccggtc
ggtgccacgggtggacgaatcctggccaccctgttgcgcgagatggaccgtcgcgaagca
cgttacggcctcgagacgatgtgtatcggcggcgggcagggcctggctgcagtgttcgag
cgcctgtcctga

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