KEGG   Rhizobium etli CFN 42: RHE_CH00415
Entry
RHE_CH00415       CDS       T00317                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ret  Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:ret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ret03016]
    RHE_CH00415 (truA)
Enzymes [BR:ret01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     RHE_CH00415 (truA)
Transfer RNA biogenesis [BR:ret03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RHE_CH00415 (truA)
 Prokaryotic type
    RHE_CH00415 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ABC89237
RhizoBase: RHE_CH00415
UniProt: Q2KD49
Position
430324..431127
AA seq 267 aa
MPRYRMTVEYDGGPYVGWQRQENGPSVQGAIEAAVLSLTGETVSVRGAGRTDSGVHAMGQ
VIHADLSKEWSPYQLQNALNAHLRLAGERVSILDVAAVPEFFDARFSALRRHYLYRIVSR
RAPLALEAGKAWWVPKTLDDEVMHAAAQRLVGRHDFSTFRSAHCQANSPVRTLDRLDVTR
SGALIEIRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVEAALEARDRKACGPVAPPDGL
YFLQVDYPEVITDRRRLPADESDDDLS
NT seq 804 nt   +upstreamnt  +downstreamnt
atgccgcgctaccgcatgaccgtcgaatatgacggcggcccctatgtcggctggcagcgg
caagagaatggtccctcggtgcagggtgcgatcgaagccgcggtgctgtcgctgaccggc
gagaccgtttcggtccgcggcgccggccgcaccgattccggcgtccacgccatgggacag
gtgatccatgccgatctttcgaaggaatggtcgccctaccagctgcagaacgccctgaat
gcgcatctgaggctggccggcgagcgcgtctccattctcgacgtcgcggcggttcccgaa
ttcttcgatgcccgcttctcggctttgcgccgccattatctctaccgcatcgtgagccgc
cgggcgccgctggcgctcgaagccggcaaggcctggtgggtgccgaagaccctcgacgac
gaggtcatgcatgccgccgcccagcggctggtcggccggcatgatttctccaccttccgc
tccgcccattgccaggcgaacagtccggtgcgcacgctcgaccggctcgatgtgacgcgc
agcggtgcgctgatcgagatccgtgccaccgcgcagagcttcctccacaaccagatccgt
tccttcgccggtacgctgaagctcgccggcgagggcaaatggacgcccgacgatgtcgag
gcggcactcgaagcgcgcgaccgcaaggcctgcggcccggtggcgccgcccgacgggctc
tatttcctgcaggtggattatcctgaggtgatcaccgatcgccgtaggctgcccgccgac
gaaagcgacgacgatctctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system