KEGG   Rhizobium etli CFN 42: RHE_CH01479
Entry
RHE_CH01479       CDS       T00317                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C protein
  KO
K03703  excinuclease ABC subunit C
Organism
ret  Rhizobium etli CFN 42
Pathway
ret03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ret00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RHE_CH01479 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ret03400]
    RHE_CH01479 (uvrC)
DNA repair and recombination proteins [BR:ret03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RHE_CH01479 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: ABC90282
RhizoBase: RHE_CH01479
UniProt: Q2KA54
Position
complement(1549459..1551498)
AA seq 679 aa
MNGRKLPDGGVLYDDTDESEDEIEVEGDVSAAPLAVAVDWNAGSLNETGLVGAELIGEFV
KRLPNSPGVYRMLNAEGDVLYVGKARSLKKRVGNYAVGRVHSNRIAQMVRQTANMEFVTT
RTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITGDHRAPAIFKHRGARARKGDYFG
PFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLYQIKRCSGPCTHEVSDEGYAEL
VQEAKDFLSGKSQKVKSHMAEAMNQAAEDLDFERAAIYRDRLAALSHVQSHQGINPAGVD
EADVFAIHHEGGVSCIQVFFFRTGQNWGNRAYFPKADPQLSSAEVLNAFLAQFYDDKPVP
KQIMLSETAEELELLAAALSEKAGHKVSILVPRRGEKRDLVDHVVGNAREAHGRKLAETA
SQSRLLEGFKETFGLAYAPQRIEIYDNSHIMGTNAVGGMVVAGPEGFVKNQYRKFNIKST
DITPGDDFGMMKEVMTRRFSRLIKEEGIPDRTAQAAAADAADMPFPAWPDVILIDGGQGQ
MTAVRAILAELGITDSVTAIGIAKGVDRDAGRERFFAPGRESFTLPPRDPVLYFIQRMRD
EAHRFAIGSHRVRRKKEMVKNPLDEIGGIGPSRKRALLQHFGTAKAVSRAALSDLMAVEG
ISEAVAKQVYNHFHEDAAK
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgaacggacgaaagctgccggatggcggcgttctctacgacgatacggatgagagcgaa
gacgaaatcgaggtggaaggcgatgtttcagccgcccctctggcggtggcggtcgactgg
aatgcgggcagcctcaacgagaccgggcttgtcggcgcggaactgatcggcgaattcgtc
aagcggctgccgaacagccccggcgtctaccgcatgctcaacgccgagggcgatgtgctt
tacgtcggcaaggcgcgcagcctgaagaagcgtgtcggcaattacgccgttggccgcgtg
cattccaatcgcattgcccagatggtgcgccagacggcgaacatggaattcgtgacgaca
cgcacggaaaccgaggcgctgcttctggaagcgaatctgatcaagcgcttgcggccgcgc
tttaacgtgctgctgcgcgacgacaagtcgtttccctatatcctcatcacgggggatcac
cgcgcgcctgccattttcaagcatcgcggcgcaagggcgcggaagggcgactatttcggg
cctttcgcttcagccggcgcggtcgggcggacgatcaactcgctgcagcgcgccttcctg
atccgcacctgcaccgacagcgtcttcgaaacgcgcacgcggccctgcctgctctaccag
atcaagcgctgttccggaccctgcacgcacgaggtcagcgacgagggttacgccgagctg
gtgcaggaggcgaaagatttcctgtccggcaagagccagaaggtgaagtcgcacatggcc
gaagccatgaaccaggcggccgaggatctcgatttcgaacgggcggcgatctatcgtgat
cggctggcagcactctcgcatgtgcagagccaccagggcatcaacccggccggtgtcgac
gaggctgacgttttcgccatccaccatgaaggcggcgtatcctgcatccaggtattcttc
ttccgcaccggccagaactggggcaaccgagcttatttcccgaaggccgacccgcaacta
tcaagcgccgaagttctgaatgccttcctcgcgcaattctacgacgacaagccggtgccg
aaacagatcatgctgtcggagacggccgaggaactggagctgctcgctgcagcgctcagc
gaaaaggctggccacaaggtttcaatcctggtgccgcggcgcggcgaaaagcgcgatctc
gtcgatcatgtcgtcggcaatgcacgcgaggcgcatgggcgaaagcttgccgagacggcg
tcgcagtcacggctgctcgaaggcttcaaggaaaccttcgggcttgcctatgcgccgcag
cgcatcgagatctacgacaactcgcatatcatgggcaccaatgccgtcggcggcatggtg
gtggcggggccggaaggcttcgtgaagaaccagtaccgcaagttcaatatcaaatcgacc
gacatcactcccggcgacgacttcgggatgatgaaggaggtgatgacgcggcggttctcg
cggctgatcaaggaggaaggcattcccgaccggacggcacaggcagccgccgccgacgcg
gccgacatgcccttcccggcctggcccgatgtgatcctgatcgacggcggccaggggcag
atgacggcggtacgcgccatcctcgccgagctcggcatcaccgacagcgtcacggcgatc
ggcatcgccaagggtgtcgaccgcgatgccggacgcgagcgcttctttgcgccgggacgc
gagagtttcacattgccgccgcgcgatccggtgctctatttcatccagcgcatgcgcgac
gaggcgcaccggttcgcgatcggctcgcaccgggtgcggcgcaagaaggagatggtcaag
aacccgctcgacgagatcggcggcatcggcccgtcacgcaaacgcgcgctgctccagcac
ttcggcacggcgaaggcggtttctcgcgccgccctttccgacctgatggcggtggaaggt
atttcggaggccgtggcaaagcaggtctataaccatttccacgaggacgccgcgaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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