KEGG   Cupriavidus pinatubonensis JMP134: Reut_A2118
Entry
Reut_A2118        CDS       T00268                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
reu  Cupriavidus pinatubonensis JMP134
Pathway
reu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:reu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Reut_A2118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:reu03021]
    Reut_A2118
   03019 Messenger RNA biogenesis [BR:reu03019]
    Reut_A2118
Transcription machinery [BR:reu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Reut_A2118
Messenger RNA biogenesis [BR:reu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Reut_A2118
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_25 Phostensin_N AAA_19
Other DBs
NCBI-ProteinID: AAZ61482
UniProt: Q46ZF1
Position
1:2333231..2334493
AA seq 420 aa
MHLTELKSLHVSALLEMAATLEIDNAQRMRKQELMFAILKKRAKMGETIYGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GNPPEAVKNRIMFENLTPLHPNRPLQLERDIKAEENITGRIIDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAIANNHPEADLFVLLIDERPEEVTEMQRSVRGEVVASTFDEPAIRHV
QVAEMVIEKAKRLVELKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSSTRREELLIKPDILQKIWILRKFISDMDEVQAMEFILDKMKATKNNAEFFDMMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcacctgacagaactcaaatcgcttcacgtgtctgcgcttctcgaaatggcggcaacg
ctcgagatcgacaacgcacagcggatgcgcaaacaggaactcatgtttgcgatcctgaag
aagcgcgccaagatgggcgaaaccatctacggagacggcaccctggaagttttgccagac
ggcttcggtttcctgcgctcgccggaaacgtcgtacctggccagcacggacgatatctat
atcagcccgtcgcagatccgccgcttcaacctgcataccggcgattcgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcactggtcaaggtcgacaaggtcaac
ggcaatccgccggaagcggtcaagaaccgcatcatgttcgagaacctgacgccgctgcat
ccgaaccggccgctccagctcgaacgcgacatcaaggcggaagaaaacatcaccggccgg
atcatcgacatgatcgcgccgattggccgcggccagcgcgcactgctggtggcctcgccg
aagtccggcaagaccgtgatgctgcagcatattgcgcacgccattgccaacaatcatccg
gaagccgacctgttcgtgctgctgatcgacgagcgcccggaagaagtgaccgaaatgcag
cgctcggtgcgcggcgaagtggtcgcctccacgttcgacgaaccggccatccgccacgtc
caggtggctgaaatggtgatcgagaaggccaagcgcctggtcgaactgaagcgcgacgtg
gtgatcctgctggactcgattacgcgtctggcccgcgcctacaacaccgtggtgccggcc
tccggcaaggtgctgaccggtggtgtcgacgccaacgcgctgcaacgcccgaagcgtttc
ttcggtgccgcgcgtaacctggaagaaggcggttcgctgaccatcatcgccaccgcgctg
atcgaaaccggcagccgcatggatgacgtgatctacgaagagttcaagggcaccggcaat
atggaagtgcacctggaacgccgactcgccgaaaagcgtgtctatccgtcgatcaacctg
aacaagtccagcacgcgccgcgaagaactgctgatcaagccggacatcctccagaagatc
tggatcctgcgcaagttcatctcggacatggacgaagtgcaggcgatggaattcatcctg
gacaagatgaaagcgacgaagaacaacgcagagtttttcgatatgatgcgcagaggcggc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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