KEGG   Candidatus Reidiella endopervernicosa: HUE57_12905
Entry
HUE57_12905       CDS       T06650                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rev  Candidatus Reidiella endopervernicosa
Pathway
rev03030  DNA replication
rev03430  Mismatch repair
rev03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rev00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HUE57_12905 (dnaE)
   03430 Mismatch repair
    HUE57_12905 (dnaE)
   03440 Homologous recombination
    HUE57_12905 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rev03032]
    HUE57_12905 (dnaE)
   03400 DNA repair and recombination proteins [BR:rev03400]
    HUE57_12905 (dnaE)
Enzymes [BR:rev01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HUE57_12905 (dnaE)
DNA replication proteins [BR:rev03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HUE57_12905 (dnaE)
DNA repair and recombination proteins [BR:rev03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HUE57_12905 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C tRNA_anti_2 Bac_A_amyl_C
Other DBs
NCBI-ProteinID: QKQ27080
UniProt: A0A6N0HXH5
Position
complement(2332886..2336404)
AA seq 1172 aa
MTPPFVHLRTHTEYSLVDGIVRIKPLVKSVAAAGMAAVAVTDQSNLFAMVKFYRAALGAG
IKPIVGADVWIEGDEESGAPSRLVLLCKDSEGYLNLSELISRSYTEGQVRGIPILKRAWF
EGTTAGLIALSGGREGDVGQALIAGNQTQANELLMAWQRLFPDSYYLELQRTGRADEERY
LHAAVELAMQHRLPVVATNDVHFLKQNDFGAHEARVCIHDGRTLDDKRRPKRHSEQQYLR
SPEEMAELFSDIPEAIANSVEIARRCNLELNLGTPVLPDFPIPPGMTEAEFFREESRQGL
EQRLERIFDKASADFAELRKPYDERLEIELDVINSMGFPGYFLIVADFIRWAKENDVPVG
PGRGSGAGSLVAYALTITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
EHYGREKVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDRIAKMIPFEIGMTLEKALEEEE
FKRAYQDEDEVRALVDLARALEGCARNAGKHAGGVVIAPSKLTDFSPLYCEEGGGNLVSQ
FDKDDVEAVGLVKFDFLGLRTLTIIDWALKTINRKRVANGEEPVDISAIPLEDEKSFKLL
KACQTTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREP
VSYPDAKYQHESLKQILDPTYGVILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKKPEEM
AKQRTVFAEGAEQNGVDSVLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTIWLKTYYPA
AFMAAVLSADMDNTDKVVTLIEECRSMELEVTPPNVNFSEHAFSVTDENVIVYGLGAIKG
VGEAAIEGIVAERLDNGLYQDLFDLCRRIDLRKANKRVMESLIRAGAFDCFEGVNRASLM
AQLPDALKAADQHANNESAGMADLFGGTNEDSAAPVTLVTLPEWDDEQRLQGEKETLGLY
LTGHPIERYEAEIEHFTSGRIEKFVGDEMTPPAGGQGGGGRQREKIVMLAGLVVGIRMMN
TRRGKMSFITLDDRTARIEVQLFDDDYQKYRNILNKDRVLVVEGGLSYDDYSGGFRMKAR
ELFDIEQARERHAKHLMIHLDSARMGEGVVDSIAAALRPFTEGRCKVCIDYLRSDARGPL
TLGDAWSVHPSDNLLHRLREVAGTESVTVEYG
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgactcccccctttgtccatctacgtacccatactgaatactcgcttgtcgacggtatc
gtgcgcatcaagccgttggttaaatccgtggcagccgcagggatggcggcagttgcggtc
accgatcagagcaatctatttgcaatggtcaagttctatcgtgcggctctgggtgctggt
atcaaaccaatcgttggtgctgatgtctggattgagggtgatgaagagagcggggcgccg
agtcgactagtgctgctgtgcaaggatagtgaggggtatcttaatctctcagagctgata
tcgcgcagctatacggaagggcaggtgcgtggtatcccgatcctgaaaagagcttggttc
gaagggacaaccgcaggactaatcgcactctccggtgggcgagagggagatgttgggcaa
gcactgatagccggtaatcaaacgcaagccaatgaactgctgatggcttggcaacgactc
tttcccgatagctactatctcgaactgcagcgaaccggaagggccgatgaggagcgctat
ctgcacgccgccgtagagctggcgatgcagcatcgtctgccagtggtggccaccaacgat
gtccactttcttaagcagaatgactttggagcacacgaggcacgcgtctgtattcacgat
ggacgtactctggatgacaaacgacgacccaaacgtcattcagaacagcagtatctgcgt
tcaccagaggagatggcggagcttttttccgatattcctgaggcgatagccaacagtgtt
gaaatagcccgacgctgtaatctcgaattgaatctgggtacgccggttctacccgacttc
ccgatcccccccggcatgactgaggcggagttcttccgagaagagtcacggcagggactt
gagcagcgtcttgagcgcattttcgataaagcgtctgcagacttcgcagagcttcgcaaa
ccctatgatgagcgccttgagatcgaactcgacgttatcaatagcatgggtttccccggt
tacttcctgatcgttgctgattttattcgatgggcgaaggagaacgatgtaccggtcgga
ccgggacgtggttcgggtgccggttcactggttgcctatgcactgacgattaccgatctt
gatccgcttgaatatgacctgctgttcgagcgattccttaatcccgaacgtgtctcgatg
cctgatttcgatgtcgacttctgcatggagggacgcgatcgggttatcgactatgtagcc
gaacactatggccgtgagaaggtctcgcagatcattacctacggttcgatggcggccaag
gcggtcgtgcgtgatgtaggtcgtgtgctcgggcacccctacggttttgtcgatcgcatc
gccaagatgattccgtttgagatcggtatgacgctggagaaggcgcttgaggaagaggag
ttcaagcgcgcctatcaggatgaggatgaggtgcgtgccctggtcgatctggcgcgagcg
ctagagggttgtgcaagaaacgccggcaaacatgctggtggtgttgtcatcgccccttcc
aagctgaccgatttctctccgctctactgtgaagagggcggcggtaatctggttagccag
ttcgacaaggatgatgtggaggcagtggggctggtcaagttcgactttctcggtctgcgt
accctgaccattatcgattgggcgctgaagacgattaatcgcaagcgcgtagcgaatggc
gaggagccggtcgatatcagcgcgattccacttgaggatgagaagagttttaaactcctt
aaggcgtgtcagaccacagccgttttccagctcgaatcacgtggtatgaaggatcttatc
aaacgtcttcaacccgactgttttgaagatattatcgcgctggtggcgctatttcgcccc
ggtccactgcagtcgggcatggttgataactttatcgatcgtaaacacggtcgtgaacct
gtctcctatcccgatgcgaaatatcagcacgaatcactaaagcaaattctcgatccaacc
tacggcgttattctctaccaggagcaggtcatgcagatcgctcaggtactggccgggtat
agcctcggcggtgccgacatgctgcgccgtgcgatgggtaagaaaaagcccgaagagatg
gccaagcagcgtaccgtgtttgccgagggtgcagagcaaaacggtgtcgattcagtgctg
gcgatgaagatcttcgacctggtagagaagttcgccggttacggtttcaataaatcgcac
tcggctgcctatgcattggtctcctaccagaccatctggctcaagacctactatcctgca
gcctttatggcggcggtgctatctgctgatatggataacacagataaggtagtaacgctg
attgaagagtgccgctccatggagctggaagtaacaccacccaacgttaatttttcagag
cacgccttctccgttaccgatgagaacgtcatcgtctatggtcttggcgctatcaagggg
gtaggtgaggcggctattgaggggatcgttgccgaacgtcttgataatggtctctatcag
gatctattcgatctctgccgtcgtatcgatctgcgtaaagcgaacaaacgcgtcatggag
tccctaattcgtgccggtgcctttgattgttttgaaggggtgaatcgtgcctcactgatg
gcgcagttgcctgatgcacttaaagcggccgatcagcacgctaataatgagagcgcaggc
atggcggatctattcggtggaaccaacgaggatagtgcagcccccgttacccttgtgaca
ctacctgagtgggatgatgagcagcggctacagggcgagaaagagaccttgggactctat
ctgactgggcacccgatagaacgttacgaggccgaaatagagcactttaccagtggacga
atcgagaagtttgtcggtgatgagatgacgccacccgctggtggtcagggcggcggtggt
cgacagcgtgagaaaattgtcatgctggcggggctggttgtcggtatccgaatgatgaac
acgcgccgaggcaagatgtctttcatcacacttgatgatcgaaccgccagaatcgaagtg
cagctctttgatgacgactaccagaagtatcgtaatatcctcaataaagaccgagtgctg
gtggttgaaggcggtcttagctatgacgactactccggtggttttcgcatgaaggcacga
gagctgttcgatattgaacaggcgcgtgagcgccacgcgaaacatctgatgattcacctc
gattcggcacgaatgggggagggggtggtcgattcgatcgctgctgcactgcgtcctttt
accgaagggcgctgtaaggtctgtatcgactacctgcgcagtgatgcccgtggtccactg
actctgggagatgcgtggagtgtccatccgagcgataatctactgcatcggctgcgtgag
gttgccggaaccgaatcggtgacggttgagtacggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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