KEGG   Rhizobium esperanzae: AMJ99_PC00262
Entry
AMJ99_PC00262     CDS       T05681                                 
Name
(GenBank) ATP-dependent DNA ligase protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rez  Rhizobium esperanzae
Pathway
rez03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AMJ99_PC00262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rez03400]
    AMJ99_PC00262
Enzymes [BR:rez01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AMJ99_PC00262
DNA repair and recombination proteins [BR:rez03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AMJ99_PC00262
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: ANL06849
Position
pRspN561c:284841..285791
AA seq 316 aa
MPSRVEPCLALLKQTVPQGPDWLYEVKWDGYRLALHIEPKGIRILTRGGHDWTHRFPTIA
AGARKLGVSSCILDGEAVVLDEEGRSDFGALQRSLGGRGGKRISTESIFYAFDLLYLDGH
DLTRTELSVRRHLLEDLIPETDGGAIRFSQELDLGGEELLEHACRLGLEGIIAKRRDSSY
RSGRLGDWQKIKCVHSDSFMIVGYEESASTRGGLGSLLLAGRKGHDWIYVGSVGTGFNRT
EAEYLRKTLNCLQTKKPVVPLKGKRLVFSQPTLIAEIEFRGWTREGSLRHPSYKGLREIQ
DNAAVFDMADGPAAIR
NT seq 951 nt   +upstreamnt  +downstreamnt
atgccgtccagagtggagccctgcctggcgctgctgaagcagacggtgccgcaagggccg
gattggctttatgaggtgaagtgggacggctaccgattggcgctccacatcgagccaaag
ggtattcgcattctcactcgtggcggccatgactggacccatcgatttccgacgatcgcc
gcgggggcaagaaaactcggtgtgtcgagctgcattctcgacggagaagccgtcgtcctc
gatgaagagggtcgctcggatttcggagcgttgcagcgctcgctcggcggcaggggtggc
aagcggatatcgaccgaatccatattctacgccttcgatctgttgtatctcgacggtcac
gacctgacgcgcacggaactgtcggtgcgccgtcatttactggaagatctgatccccgag
accgacggtggcgccattcggttctcgcaagaactggatttgggtggcgaggaactgctc
gagcacgcatgccgtctgggcctggaaggcatcatcgcaaaacgcagggacagttcttac
cggagtggccgcctcggggattggcagaagatcaaatgtgttcacagcgacagcttcatg
atcgtgggttacgaggaatcggccagcacccgcggcgggctcggcagtctgttgcttgcg
ggtcgaaagggtcacgactggatctatgtcgggtccgtcggcacggggttcaatcgaacc
gaggcggaatatttgcgcaagacgctgaactgtctccaaacgaaaaaacccgtcgtgccg
ctgaaagggaagcggcttgttttttcgcaaccgaccctcatcgccgaaatcgagtttcgc
ggctggacgcgtgagggcagcctacgccacccctcatataaggggctccgcgagatccag
gataatgctgccgtcttcgatatggctgatggcccggctgcgatcagatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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