KEGG   Rhodococcus fascians D188: A3L23_01955
Entry
A3L23_01955       CDS       T04328                                 
Symbol
gabD2
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
rfa  Rhodococcus fascians D188
Pathway
rfa00250  Alanine, aspartate and glutamate metabolism
rfa00310  Lysine degradation
rfa00350  Tyrosine metabolism
rfa00650  Butanoate metabolism
rfa00760  Nicotinate and nicotinamide metabolism
rfa01100  Metabolic pathways
rfa01120  Microbial metabolism in diverse environments
Module
rfa_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    A3L23_01955 (gabD2)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    A3L23_01955 (gabD2)
   00310 Lysine degradation
    A3L23_01955 (gabD2)
   00350 Tyrosine metabolism
    A3L23_01955 (gabD2)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    A3L23_01955 (gabD2)
Enzymes [BR:rfa01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     A3L23_01955 (gabD2)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     A3L23_01955 (gabD2)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     A3L23_01955 (gabD2)
SSDB
Motif
Pfam: Aldedh LuxC
Other DBs
NCBI-ProteinID: AMY53300
UniProt: A0A165LNE4
Position
2039360..2040913
AA seq 517 aa
MPAPSTATFSRLADLIAIPDADSRPTKTITEVFTGKELATIPVGTAADALAAIARVRTAQ
AAWAKRPVSERAEIFHRYRDLVLAHRDELMDMAQAETGKSRAAALEEVLDISMTSRHYAR
TAAKLLAPKKVTGMLPVLTKTRVRYQPKGVVGIISPWNYPMTLAVSDAIPALLAGNGVVL
KPDSQTPYCALACVELLYKAGLPRDLFAVVPGPGSVVGTAIVENTEYVMFTGSTATGQLL
AEQAGRRLIGFSAELGGKNAMIVAKGANLREVSDAAVRACFSNSGQLCISIERIYVEKSI
AAEFTEKFGQRVRNMTVGADYEFGIEMGSLISEDQIKTVSAHVDDAKVKGATVVAGGKAR
PDIGPLFYEPTLLTNVTEDMECAATETFGPLVSIYPVVDVDEAIAKANDTDYGLNASVWA
KTKAQGEAIAARLHAGTVNVDEGYAPTWGTTGAPMGGMGVSGMGRRHGNEGLLKYTEPQT
IATTRLLNLGGPRGLPPKLWAKIMPPFVKALKYVPGR
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgcctgctccgtccactgcgaccttttcccggctcgctgatctcatcgccattcccgac
gcggactcgcgtcccaccaagacgatcaccgaggtgttcaccggtaaggagctggcgacc
attccggtcggtacggctgcagatgccctggctgcgatcgcgcgcgtccgtaccgctcag
gcggcctgggccaagcgtccggtctccgagcgcgcagagatcttccaccgctaccgcgac
ctggtgctcgcgcaccgcgacgagctcatggacatggcgcaggccgagactggcaagtcc
cgcgccgccgccctcgaggaagtcctcgacatctcgatgacctcgcggcactacgcacgc
acggccgccaaactgctggccccgaagaaggtcaccggcatgcttcccgtgctgaccaag
actcgcgttcggtaccagcccaagggcgtcgtcggaatcatctcgccgtggaactacccg
atgaccctcgcggtgtccgacgccattccggcgctgctggccggtaacggcgtcgtgctc
aagcccgacagccagacgccgtactgcgcgttggcctgcgtcgagctgctctacaaggcc
ggtctgccccgcgacctgttcgccgtggtccccggccccggctcggtggtgggcaccgca
atcgtcgagaacaccgaatacgtcatgttcaccggctccacggccaccggtcagctcctg
gccgagcaggcggggcgtcgactcatcggtttctccgccgagctcggcggcaagaacgcc
atgatcgtcgcgaagggcgcgaacctgcgggaagtatccgacgcggcagtgcgcgcctgc
ttctccaactccggtcagctctgcatctccatcgagcgcatctacgtcgagaagtcgatc
gccgccgagttcaccgagaagttcggccagcgggtacgcaacatgaccgtgggtgccgat
tacgagttcggcatcgaaatgggcagcctcatctccgaggaccagatcaagacggtctcg
gcgcacgtcgacgacgccaaagtcaagggtgcgaccgtcgtcgcgggcggcaaggcgcgt
cccgacatcggcccgctgttctacgagccgacgttgctgacgaacgtcaccgaggacatg
gagtgcgcggcgaccgagaccttcgggccgctggtgtcgatctaccccgtcgtcgacgtc
gacgaggccatcgcgaaggccaacgacaccgactacggattgaacgcgagcgtctgggcc
aagacgaaggcgcagggcgaggccattgcggcacgtctgcacgcgggcacggtcaacgtc
gacgagggctacgcgccgacgtggggcaccaccggtgcgccgatgggcggaatgggcgtc
tccggaatgggccgcaggcacggaaacgagggactgctcaagtacaccgagccgcagacc
atcgcgacgacccgcctgctcaatctcggtggaccgcgcggacttccgccgaagctgtgg
gcaaagatcatgcctcccttcgtcaaagcgctgaagtacgtacccggccggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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