KEGG   Rhodococcus fascians D188: A3L23_04520
Entry
A3L23_04520       CDS       T04328                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rfa  Rhodococcus fascians D188
Pathway
rfa00300  Lysine biosynthesis
rfa00470  D-Amino acid metabolism
rfa01100  Metabolic pathways
rfa01110  Biosynthesis of secondary metabolites
rfa01120  Microbial metabolism in diverse environments
rfa01230  Biosynthesis of amino acids
Module
rfa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    A3L23_04520 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    A3L23_04520 (dapF)
Enzymes [BR:rfa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     A3L23_04520 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AMY55823
UniProt: A0A165N1Y0
Position
complement(4782835..4783704)
AA seq 289 aa
MEFAKGHGTQNDFVVLPDPGAELELTRSAVAVLCDRRQGIGADGILRVARAGVLRDAGVL
DRIPAGVEADDWFMDYRNGDGTIAEMCGNGVRVFAHYLRVHDLEQRDQFVVGSRAGARAV
TVHSYDETDADVTVAMGDVTLLGSSATTLAGAAYEGIGVDVGNPHLACVDPALNRTALRA
LDFTAPPTLDTEFFPHGANVEILTRLDDGAVEMRVFERGVGETRSCGTGTVAAAAAALSY
EGLETGDVSVGVLGGRVRVAIDHVGATLRGPSVLLARGEVDDRWFAGQS
NT seq 870 nt   +upstreamnt  +downstreamnt
atggaattcgccaagggccacggaacgcagaacgatttcgtcgtgctgccggatcccggt
gccgagctcgaactcacccgctcggcggtcgcggtgctgtgtgatcgacggcaggggatc
ggtgccgacgggatactgcgcgtcgcgcgcgccggggtgctgcgggacgcgggtgtgctc
gatcgaatcccggccggtgtcgaggccgacgactggttcatggactaccgcaacggtgac
ggcaccatcgccgagatgtgcggaaacggggtccgagtcttcgcgcactacctgcgagtc
cacgatctcgagcagcgcgaccagttcgtggtcggctcccgcgcaggcgcacgtgcggtg
acggtgcattcgtacgacgaaaccgatgccgacgtgaccgtggccatgggcgatgtcacc
ctgctgggttcgagcgcgacgaccctggccggtgcagcgtacgaggggatcggtgtcgat
gtcgggaacccgcatctggcctgcgtcgatcccgcgctgaaccgcaccgcgttgcgagca
ttggacttcacggctccgccgactctcgataccgagttcttcccccacggtgcgaacgtc
gagattctgacccggctcgacgacggcgcagtcgagatgcgcgtcttcgaacgcggcgtc
ggagagacacgctcgtgtggcaccggaaccgtcgctgccgccgctgccgcgctcagttac
gaggggctcgagaccggagacgtgagtgtcggtgtgctcggcggtcgggtccgagtggcc
atcgaccacgtcggtgcaaccctgcgcggaccgtcggtactgctcgcccggggagaggtc
gacgaccgttggttcgccggtcagtcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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