KEGG   Rhodococcus fascians D188: A3L23_04740
Entry
A3L23_04740       CDS       T04328                                 
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
rfa  Rhodococcus fascians D188
Pathway
rfa00970  Aminoacyl-tRNA biosynthesis
rfa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    A3L23_04740 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rfa03029]
    A3L23_04740 (gatB)
Enzymes [BR:rfa01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     A3L23_04740 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     A3L23_04740 (gatB)
Mitochondrial biogenesis [BR:rfa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    A3L23_04740 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey YqeY
Other DBs
NCBI-ProteinID: AMY56041
UniProt: A0A165N891
Position
complement(5008552..5010081)
AA seq 509 aa
MHKLQSMTAATVDLIDYDDVLATFDPVLGMEVHVELGTATKMFCGCPTAFGAEPNTQVCP
VCLSLPGALPVVNAAAVESAIRIGLALNCSITPWGRFARKNYFYPDQPKNYQISQYDEPI
ATEGYLDVVLDDGSTFRVEIERAHMEEDTGKSTHVGGATGRIEGASHSLLDYNRAGVPLV
EIVTKTITGTGARAPEVARAYVTALRDLLKSLNVSDVRMDQGSLRCDANVSLMRKSATEF
GTRTETKNVNSLKSVEVAVRYEMRRQAAVLESGGEVTQETRHFQESDGTTTAGRKKETAE
DYRYFPEPDLAPVAPDAAWIEELRATLPELPWLRRGRIQKDWGVSDEEMRDLVNSGALEL
VAATVDAGASAQAARSWWVSYLAQQANIAGVELGDLAITPAQVAEVAALVADGKVNNNGA
RQIVDGVLAGEGEPAEVMSARNLVLEKDDTKLQAAVDEALAANPGVVDKIRSGKVQAAGA
IVGAVMKATRGQADAARVKELVLAACGQS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgcataaactacagagcatgactgctgcaaccgtcgatctgatcgattacgacgatgtg
ctcgccacgttcgaccccgtgctcggcatggaggtccacgtcgagttgggtacggccacc
aagatgttctgtggttgccccaccgcgttcggtgcggagcccaatacgcaggtgtgcccg
gtgtgcctcagcctccccggcgcactgccggtggtcaacgctgctgcggtggagtcggcg
atccgtatcgggctggcgctcaattgctcgatcactccgtggggacggttcgcgcggaag
aactacttctacccggatcagccgaagaactaccagatctcgcagtacgacgagccgatc
gccacggagggttacctcgacgtcgtgctcgacgacggcagcacgttccgcgtcgagatc
gagcgtgcccacatggaggaagacaccggcaagtcgacgcacgtcggtggcgcaaccgga
cgaatcgagggcgcatcgcattcgttgctcgactacaaccgtgccggtgtgccgttggtg
gagatcgtgaccaagaccatcaccggtaccggggcgcgggcaccggaggtggcgcgggcg
tacgtgaccgcattgcgtgacctgttgaagtcgctgaacgtctccgatgtgcggatggat
cagggttcgttgcgctgcgatgccaacgtctcgttgatgcggaagtcggccaccgagttc
ggtactcgcaccgagacgaagaacgtcaactcgctcaagagcgtcgaggtcgccgtgcgc
tacgagatgcgccgtcaggctgcggtgctcgaatccggcggcgaggtgacgcaggaaact
cgacacttccaggagtccgacggcacgaccacggcgggccggaagaaggagaccgcggag
gactaccgctacttcccggagcccgacctcgctcccgtggctccggatgcagcgtggatc
gaggaactgcgagccactctgcccgagctgccgtggttgcgccgcgggcgaattcagaag
gactggggcgtatccgacgaggagatgcgcgacttggtcaactcgggtgctctcgaactc
gtcgcggcgaccgtcgacgcgggcgcttcggcgcaggctgcgcggtcgtggtgggtgtcg
tacctggcgcagcaggccaacatcgccggcgtcgaattgggggatctggcgatcactccg
gctcaggtggccgaggtggcagccttggtggccgacggcaaggtcaacaacaacggtgcc
cgtcagatcgtggacggcgtgttggccggtgaaggtgagcccgcagaggtgatgtcggcg
cggaacctggtgttggagaaggacgacaccaagctccaagccgccgtcgacgaagcactt
gccgcgaaccccggtgtggtggacaagattcgcagtggcaaggtccaggccgccggagcc
atcgtcggcgcggtgatgaaggcgacgcggggacaagccgatgccgcccgagtcaaggaa
ctcgtgctggcggcatgcggtcagtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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