KEGG T00252: RF

Rickettsia felis: RF_0093

Entry

RF_0093           CDS       T00252

Symbol

virB6_5

Name

(GenBank) TrbL/VirB6 plasmid Conjugative transfer protein

K03201

type IV secretion system protein VirB6

Organism

rfe Rickettsia felis

Pathway

rfe03070

Bacterial secretion system

Brite

KEGG Orthology (KO) [BR:rfe00001]
09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RF_0093 (virB6_5)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rfe02044]
    RF_0093 (virB6_5)
Secretion system [BR:rfe02044]
Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RF_0093 (virB6_5)

SSDB

Motif

Pfam:

TrbL DUF2501 SCP2_2

Other DBs

NCBI-ProteinID:

AAY60944

UniProt:

Q4UNB4

Position

105951..109418

AA seq 1155 aa
MNKNIFITLLISSLLLLSGCTGDTCIDPDDFGFIKFNVSSRYNPEEITSRQEGDQVAPWR
DSAYKVNGYPLTVMVRPWSYILGDKNTSGQLSAWCPWYGQKNNTTTLAAFCVKLQPCTFW
DNARLDMCTPNPANQNDAMISNPPCIMTDGVGLYFLIAAKNTDPNISPDSQRKPQGITQH
LGELTSSVGYEFYSISSTGQFLPAGGINYQYKGEDKSKYAQSPLYFKIIDKFYDDNSGQY
RLVIKSGVTDTRPDPLQFLTDLIKGVLFGKDGIIKKTYQQIIDTPGYRMSVSAILTLYIM
FTGFSFLIGNINLTHVELIVRILKVSIVSILLSTDKAWTFFHDYLFVFFIDGVQQILQII
NEAAATGPGSQSLLGLLISPQTLSKLFSLLFVDWLGFIYIILYLIALYFIFFLIFKATII
YLTALITIGMIIIMGPIFICFMLFNITRSLFENWLRQLISYALQPIILFAGIAFISMIIR
TEIYSTLGFGVCKHDFPNLGPINEIFGSFLEDIDPSLGNSIFYWWFPVPMKGGINNFHKA
KILVPEDHIIVDDSCKNDPDKCKHCAAYECIDERYIELPFLDLVKDAKRISNFINGKFVQ
LDGILLIFVSIYLLSKFNDTAISTAQFIAGTSGNLTDIQKVNQQSYESAAKQMNRPLSYV
AKTVSVPVTTRVSAKLEETSMFFAKGFEDIMMGRLEKQALGSSANKAVQNEVKRKYGIDS
KDVKMNAITDYENGISGLLKNLPKGNELKAKELSQMKFTQLRDKIAANKYGVKDYAALSE
EQKRELDKSLKDANLRELASDANFTKDYQDAYKYAHQEMSGRGVGLFGKNIKPLRSWQEM
EHRVDTKRKLKEERRVGIGEKLYAGYTGIKRGALTAIVGKDLRDAYEGNLTSAEWHDFEY
NDPRLRTYSEKLKDDEKAREREELQMHINKETLAAQADILSPEYLARLEKAGRQSDVEYY
QELAQRKLIHEVRGRLFEEGEPVMMGDRFMREKATDSQMRDMIDNAHRKHAEFIEGDRYT
RRQEHYDIMHEKAEGNLEQTYKELKDHFKRDDINIEEMPALIAQKIKDTEQGPEVDAKIT
EELNNFNADVKNYEYSTEVLNKIEDRKQAITDEVNAQIDQINKYRENAKMEKYVRPIVNE
GRKLRKLEDHLRGMK

NT seq 3468 nt +upstreamnt +downstreamnt
atgaacaaaaatatttttattacattattaatatcatcgttattactgctttccggttgt
accggcgatacttgtattgaccctgatgatttcggttttatcaaattcaatgtctcttct
agatataatccggaagaaattacttcaagacaggaaggtgatcaggtagcaccatggcgt
gatagtgcttataaagtaaatggttatcctttaaccgttatggtaagaccgtggagttat
atacttggtgataaaaatacttcaggtcagttatctgcatggtgtccgtggtacggtcag
aaaaataacacaactactttggctgctttttgcgttaagctacaaccgtgtactttttgg
gataatgctagacttgatatgtgtactcctaatcccgcaaatcaaaatgacgcaatgatt
agtaatcctccatgtataatgacagacggggtcgggctttattttcttattgccgctaaa
aataccgatcccaatatttcaccggactcacagcgtaaaccgcaaggtataactcagcat
ttaggagaacttacttcgagtgtaggctatgaattttatagtattagtagtacaggacaa
ttcttgccagcagggggaataaattatcaatataaaggtgaggataagtcaaaatatgct
caatctcctctttattttaagattatagataaattttatgatgataatagcgggcaatat
agattagtaatcaagtccggagttactgatactagacccgatccgttacaatttttaacg
gatttaataaaaggagtattatttggtaaggatgggattataaagaaaacttatcaacaa
ataattgatactccgggttataggatgagtgtctcggctattttaactctatatataatg
tttacgggcttttcctttttaataggtaatataaaccttactcatgtcgaacttatagtt
agaatattaaaagttagtatagtctcaatattattaagtacggataaagcttggacattt
tttcatgattatttattcgtattttttattgacggggttcagcaaatactgcaaataatt
aatgaagctgcggctaccggtcctggttctcaaagtttgctagggttacttatttctcct
caaactttatctaaattattttctttactatttgttgattggcttggttttatatatatc
attctatatttaatagccctatattttattttctttcttatatttaaagctactattata
tatctaaccgctcttataactatcggtatgattataattatgggaccgatatttatttgt
ttcatgttatttaatataactcgttcgttatttgagaattggttaagacaattaatatca
tatgcattacagcctataattttatttgccggtatcgcttttatttcaatgatcatcaga
accgaaatatattcaactcttggttttggggtatgtaaacatgattttcctaatttaggt
ccgataaatgaaatattcggtagttttcttgaggatatagatccaagccttggtaattca
atattttattggtggttccctgtaccaatgaaaggaggtataaataatttccacaaagca
aagatattagtccctgaagatcatataatagtagatgattcttgtaagaatgaccctgat
aaatgtaagcattgtgctgcgtatgagtgtatagatgaacgctatattgaattaccgttt
ttagatttagttaaagatgcaaaaaggattagtaattttataaacgggaaatttgtccaa
cttgatgggatattactaattttcgtgtctatttatttgctaagtaaatttaatgatact
gctatatcgacggcacaatttattgccggtacttcaggtaatttaacagacatacaaaaa
gttaatcagcaatcttatgaatctgcagcgaagcaaatgaatagaccattaagttatgta
gctaagacggtaagtgtacctgtaactacccgtgtaagtgcaaagttagaagaaactagt
atgttctttgctaaaggatttgaagatataatgatgggaaggcttgaaaagcaagctctc
ggttcttcagcaaacaaagccgtacaaaatgaggttaagagaaaatacggtatagattct
aaagatgtaaaaatgaatgctattactgattatgaaaacggtatttcaggattgttaaag
aatttacctaaagggaatgaattaaaagcaaaagaactatcgcaaatgaaatttactcag
cttcgagataaaattgctgcaaataaatatggagtaaaagattacgccgctttaagtgaa
gaacaaaaaagagagcttgataagtcattaaaagatgctaacttacgtgaactcgctagc
gatgcgaactttactaaagattatcaagatgcttataaatatgctcaccaagaaatgtca
gggcgaggtgtcggtctgttcggtaaaaatataaaaccgcttagaagttggcaagagatg
gagcatcgtgttgatacaaaacgtaaattaaaagaagaaaggcgtgtaggtataggtgaa
aaactctatgccggttatacgggaataaaaagaggagctttaactgcaatagtcggtaaa
gatttacgtgatgcttatgagggtaatctaaccagtgccgaatggcatgattttgaatat
aacgatccaaggcttagaacttatagcgaaaaattaaaagatgatgaaaaagcacgggaa
cgtgaagagctccaaatgcatattaataaggaaacattagctgctcaagcagatatatta
tcaccggaatatctagcaagactagaaaaagcaggtagacagagtgatgtagaatattat
caagaattagctcaaagaaagcttattcatgaggtgcgtggtaggttattcgaggaaggt
gaaccggtaatgatgggcgaccgatttatgcgtgagaaagctactgattctcagatgcga
gatatgatagataacgcccatagaaaacatgcagaatttatagaaggagatcgatatact
cgtcgccaagagcattatgatattatgcacgagaaagctgaaggaaatttagaacaaact
tataaagagcttaaagatcatttcaaaagagatgatatcaacattgaggaaatgccggca
ttaatagcacaaaagatcaaagatactgagcagggacctgaagtagacgcaaagattacg
gaagagcttaataactttaatgctgatgttaaaaattatgaatatagtactgaagtatta
aataaaatagaggatagaaagcaagctattaccgatgaagtcaatgctcagatcgatcag
attaataaatatagggaaaatgccaaaatggaaaaatatgtgagaccaatagtaaatgaa
ggcagaaaactaagaaaattagaagatcatttgagagggatgaaatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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