KEGG   Reinekea forsetii: REIFOR_03039
Entry
REIFOR_03039      CDS       T05208                                 
Symbol
dbpA
Name
(GenBank) ATP-dependent 23S rRNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
rfo  Reinekea forsetii
Brite
KEGG Orthology (KO) [BR:rfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rfo03009]
    REIFOR_03039 (dbpA)
Enzymes [BR:rfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     REIFOR_03039 (dbpA)
Ribosome biogenesis [BR:rfo03009]
 Prokaryotic type
  rRNA helicases
   REIFOR_03039 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 P-loop_SecA
Other DBs
NCBI-ProteinID: ATX78158
UniProt: A0A2K8KTU8
Position
complement(3314957..3316345)
AA seq 462 aa
MNQPLFSTLKLKPELESNLESLGFKTMTPIQAQSLPLILKNQDVIGQAKTGSGKTAAFGL
GLLQKLDVKRFRIQSLVLCPTRELADQVANDIRRLGRGIHNIKVLTLCGGMPFGPQLGSL
EHGAHIIVGTPGRVEEHVRKGSLRLEDVNMLVLDEADRMLDMGFQEALDAIIGEVPDQRQ
TLLFSATFAQQIKKIAARIMISPQMIEVASTHDELTIEQKFFQVTDHDDRLLVLKLVLGR
YQPESTIVFCNTKKETDEVADALFSQGYSATALHGDLEQWQRDQVLVRFANKSTSILIAT
DVAARGLDIDSLDAVVNFHIAREREVHTHRVGRTGRAGSKGLAMSFFNAQEAHRVALLDL
EIDPIADAEARPGADYLEVAAMVPKMSTLQIDGGKKQKVRAGDILGALTGNDGLAGTDVG
KIHIFDNCAYVAVRRKVAGQALQSITDGKLKGRSFRVRAIKG
NT seq 1389 nt   +upstreamnt  +downstreamnt
ttgaatcagccgctattttcaacgttaaagttaaagcccgagttagaatccaacctagaa
tcgctcggttttaaaacgatgacgcccattcaagctcagagcctaccgctgattttgaaa
aatcaggatgttatcggtcaggcgaagaccggctccggtaaaaccgccgcctttggcctg
ggtttgctgcaaaagctcgatgtaaagcgctttcggattcaatccttagtactctgcccg
acccgtgaattggccgatcaggttgccaatgatattcgtcggttgggtcgaggcattcac
aacattaaggttctaaccctttgtggcggcatgccctttggtccgcaattgggctcgctc
gaacacggtgcccacattatcgtcggtaccccaggacgcgttgaggaacatgtccgcaag
ggttcgctgcgcttagaagacgttaatatgctggtgctcgatgaagccgatcgaatgctc
gatatgggctttcaggaagccctcgatgcgatcatcggtgaagtgcccgatcaacgtcaa
accctgttgttcagtgccacctttgcgcagcagatcaaaaagattgccgcccggatcatg
atttccccgcagatgatcgaggtggcctcgacccatgacgagctgactatcgagcagaag
tttttccaggtcaccgatcatgatgaccggctgctggtgttgaagctggtgttgggacgc
tatcagccggaatcgaccatcgtgttctgtaacaccaaaaaagaaaccgacgaggtcgcg
gacgcgctgttcagtcagggttacagtgccaccgcattgcacggagacttagagcaatgg
cagcgcgatcaggtcctcgtgcgctttgccaataagagcacctcaatcctaatcgcaacc
gatgtcgccgctcggggtctggatatcgactcgctcgatgccgtggtcaacttccatata
gcgcgtgaacgcgaagtccatacccaccgggtcggccgaaccggtcgggccggtagtaag
ggtctggcgatgtcgttcttcaacgcccaggaagcgcatcgcgtcgcgttactcgatctg
gaaatcgacccgattgccgatgctgaagctcgaccgggtgccgactatttggaggtggcg
gccatggtgccgaagatgtcgaccttgcaaatcgatggcggtaaaaaacagaaggttcga
gcgggtgatatcttgggtgccctaaccggtaacgacggtctggccggtaccgatgtcggt
aagatccatatctttgataactgcgcctatgtggccgtgcgccgtaaggttgctggccaa
gcgctacagtcaatcaccgacggcaagctcaagggtcgcagtttccgagtgcgcgccata
aagggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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