KEGG   Reinekea forsetii: REIFOR_03346
Entry
REIFOR_03346      CDS       T05208                                 
Symbol
trmE
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
rfo  Reinekea forsetii
Brite
KEGG Orthology (KO) [BR:rfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rfo03016]
    REIFOR_03346 (trmE)
Transfer RNA biogenesis [BR:rfo03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    REIFOR_03346 (trmE)
 Prokaryotic type
   Methyltransferases
    REIFOR_03346 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Dynamin_N AIG1 AAA_28 ABC_tran Roc Phage_Mu_F MCM HOIP-UBA AAA_29 Ras AAA_16
Other DBs
NCBI-ProteinID: ATX78449
UniProt: A0A2K8KX83
Position
complement(3655317..3656678)
AA seq 453 aa
MYHSSETIVAVATPPGRGGVGIIRISGAKARDLATGLLQLEPKPRYAHYGPFYDDLQQVI
DSGIALFFPGPHSFTGEDVLELQGHGGPVILEMLLEQLVRLGCRLARPGEFSERAFLNDK
IDLTQAEAIADLIDASSREAARSAVRSLQGDFSKAVHRLVEQLIQLRIYVEAAIDFPEEE
IDFLSDGKVEGDLRGIMAQLATVVATANQGSLMREGMTVVLAGRPNAGKSSLLNALAGHD
RAIVTEVAGTTRDVLKEPIHLDGMPLHIIDTAGLRDTPDAIERIGVARAWTEIENADRIL
LLVDASESAGTEPDQIWPDLMHRLVDRQNITVVRNKIDKTGETAGFTASEPPVLRLSVQQ
GEGIEALRSHLKQLMGFTGNHESGFIARRRHLDALAVAEAALDSGLAQLLGPAAGELLAE
DLRFAQNALNEITGEFSPDDLLGRIFSSFCIGK
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtatcattcgagtgaaaccattgtcgccgtcgccacgccgcctgggcgcggcggtgtt
ggcatcattcgtatttccggtgccaaggcgcgggacctggcaacaggcctgttacagctc
gagcctaagcctcgctatgcccattacggccccttctatgacgacctacagcaggtgatt
gacagcggtatcgcgctattctttcctggcccgcattcctttaccggtgaagacgtttta
gaactgcagggtcacggtggtccggtgatactcgagatgctgctcgaacagctggtgcgc
cttggttgtcgcttggcccggccgggagagttctcggagcgggcgttcctcaatgataag
atcgacctgacccaggcggaggcgatcgccgatctgattgacgccagttctcgcgaggcg
gctcgatcggccgttcgatcgttgcagggtgacttttccaaggctgttcaccgtctggtg
gaacagttaattcaattgcgcatctatgttgaggccgcgatcgactttcccgaagaggag
atcgactttctctccgacggcaaggtagagggcgatttacgcggcataatggcccaactt
gcgaccgtcgtggcgacggcgaatcagggtagcctgatgcgtgaaggcatgacggtagtg
cttgccggtcggccaaacgccggaaaatccagtctgctcaacgccttggccggccacgat
cgggccattgtgaccgaggtagccggcaccacccgtgatgttctcaaggaacccattcat
ctagacgggatgcccctacatataatcgataccgcaggtctgcgcgatacccccgacgcg
atagaacgcattggcgtggcgcgagcctggacggaaattgaaaacgccgaccgtattttg
ctgttggtcgacgccagtgaatcggccggcaccgaacctgaccagatttggcccgatctg
atgcatcgtctggttgatcggcaaaatatcaccgtggtgcgtaacaagatcgataagact
ggcgagacggccggctttaccgcgtccgagccgccggttttgcgcctctcggtgcagcag
ggcgaagggatcgaggccttgcgcagtcatctaaaacagctgatgggcttcaccggtaac
cacgagtccggttttatcgcgcgtcggcgccatctggatgccttggccgtggccgaagcc
gcgctcgactctggcttggcccaactgcttgggccggccgcaggggaattgctcgccgag
gatctgcgctttgcacagaatgcgctcaatgagatcaccggtgaattcagtcccgacgac
ttgctgggacgaatcttcagtagcttctgtattggcaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (41)   

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