KEGG   Rhodoferax ferrireducens: Rfer_3929
Entry
Rfer_3929         CDS       T00334                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rfer_3929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfr03400]
    Rfer_3929
Enzymes [BR:rfr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Rfer_3929
DNA repair and recombination proteins [BR:rfr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Rfer_3929
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 DUF383
Other DBs
NCBI-ProteinID: ABD71628
UniProt: Q21RH5
Position
4387758..4388549
AA seq 263 aa
MFKLTSLNLNGIRSATAKGLEAWLTKTQPDCICVQEVKAQALDVQDRFEHLAGLRGHFHF
AEKKGYSGVGLYSRHEPSDVRVGYGSSQFDAEGRYVELRFDTPSAKRSIISCYFPSGSSG
EERQQAKFRFLEEFYLHLAQLKNGREFILCGDVNIAHQEIDLKNWKGNRKNSGFLPEERA
WMTKLLTEAGLVDVYRQLQPTATDEAYTWWSNRGQAYAKNVGWRLDYHLATPAMAALARS
ETIYKAEKFSDHAPLTIEYDWTL
NT seq 792 nt   +upstreamnt  +downstreamnt
ttgtttaaattaaccagcctcaacctcaacggcatccgctctgctaccgccaaaggcctg
gaagcctggctcaccaagactcagcctgattgtatttgtgtacaggaggtcaaggcccag
gccctggacgtgcaagaccgatttgagcatctggccggcctgcgcggccactttcatttt
gccgagaaaaaggggtactccggtgttggcctctacagccggcacgaacccagcgatgtg
cgggtcggctacggttcgtcccaatttgacgccgagggccgttacgtggaactgcgtttt
gacacaccctcggccaagcgctccatcatcagttgctacttccccagcggctcgtccggc
gaggaacgccagcaggccaagtttcgttttctggaagagttctatttgcatttggcgcag
ctcaagaacgggcgcgagttcattctgtgcggtgacgtgaacatcgcgcaccaggaaatt
gacctgaaaaactggaaaggcaaccgcaaaaactcaggttttttacccgaggagcgggcc
tggatgacgaagttgttgaccgaggccggactggtggatgtgtaccggcaactgcaaccc
accgccacggatgaagcctacacctggtggagcaaccggggtcaggcctatgccaagaac
gtgggctggcggctggactaccacctggccacgccagccatggcggcgctggcacgctcg
gaaaccatctacaaagctgaaaaattctcggatcacgcgccgctcaccatcgagtatgac
tggacgctttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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