KEGG   Rathayibacter festucae: C1I64_08830
Entry
C1I64_08830       CDS       T06173                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rfs  Rathayibacter festucae
Pathway
rfs03030  DNA replication
rfs03430  Mismatch repair
rfs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C1I64_08830
   03430 Mismatch repair
    C1I64_08830
   03440 Homologous recombination
    C1I64_08830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rfs03032]
    C1I64_08830
   03400 DNA repair and recombination proteins [BR:rfs03400]
    C1I64_08830
Enzymes [BR:rfs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C1I64_08830
DNA replication proteins [BR:rfs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C1I64_08830
DNA repair and recombination proteins [BR:rfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C1I64_08830
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 HROB
Other DBs
NCBI-ProteinID: AZZ52150
UniProt: A0A3Q9USF4
Position
complement(1882356..1885868)
AA seq 1170 aa
MPSNDSFVHLHVHSEYSMLDGAARVKPLIDAAVEEGMPAIAVTDHGNVFGAFDFWRTATA
AGIKPIIGTEAYITPGTHRSDKTRIRWGDGGGDDVSGSGAYTHMTLLSSTTTGMHNLFRL
SSRASIEGYYFKPRMDREILAEHSEGLIATTGCPSGEVQTRLRLGQYKEARQAAADYRDI
FGKENYFAEIMDHGLEIERRVIGDVIRLAKDLDLPLVATNDLHYTHAHDATSHAALLCVQ
SGTTLDDPKRFKFDADEFYLKSPREMRQVFRDHPEACDNTLLIAERCDVQFDTSANYMPR
FPVPEGETEDTWFVKEVEAGLNERYPDGISQEVRDRADYETRVILQMGFPGYFLVVADFI
NWSKRNGIRVGPGRGSGAGSMAAYAMKITDLDPLKHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEVIRYVTDKYGDERVAQIVTYGTIKAKQALKDASRVLGFPFGMGEKLTKAMPPAIM
GKDIPLTGINDPEHPRYKEALDVRNVIAEDPQAKLVFETALGLENLKRQWGVHAAGVIMS
SDPLKDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIRANRGQ
DLVLEDLALDDPAAYELLARGDTLGVFQLDGGPMRGLLRLMKPDNFEDISAVLALYRPGP
MGADSHTNYALRKNGVQEITPIHPELEEPLAEVLGGTYGLIVYQEQVMSIAQKLAGFTLA
QADLLRRAMGKKKKSELDKQFEGFSGGMADNGYSMAAVKTLWDILLPFSDYAFNKAHSAA
YGVISYWTAYLKAHFPAEYMAALLTSVGDSKDKMAAYLNECRRMGIKVLPPDVNESIGFF
TAVGPDIRFGLGAVRNVGTNVVEGIRVAREEKGRFESFHDFLRKVPLPVANKRTIESLIK
AGAFDSLGSTRRALVEVHEDAVEAAVGEKRNEANGQVGFDFDSLWDEPQAAIQVPTRPEW
AKRDKLAFERDMLGLYVSDHPLAGLETELAKHYSTTIADLLVSESIGDGETVVVAGLVTS
VQHRMAKASGNQYGMIQVEDFGGEITCMFMGKAYQEFAPALTNDSIVVVRGRVSMRDDGM
NLHAFSLFAPEMSQDGDSGSLTVSMPESRATTDTVSQLSDVLIRHSGRTEVRLKLIKGDT
ARVFEVPFPVRITPDLFGELKSLLGPNCLY
NT seq 3513 nt   +upstreamnt  +downstreamnt
ttgccgagtaacgattccttcgtccacctgcacgtgcacagcgagtactcgatgctcgac
ggtgccgcccgggtcaagccgctgatcgacgcggcggtggaggagggcatgccggcgatc
gccgtcaccgaccatggcaacgtgttcggcgccttcgacttctggcgcaccgcgaccgcg
gcggggatcaagccgatcatcggcaccgaggcgtacatcacccccggcacgcaccgctcg
gacaagacccggatccgctggggagatggcggcggcgacgacgtctccggctcgggcgcc
tacacgcacatgacgctgctgagctcgacgacgaccggcatgcacaacctcttccggctg
tcctcgcgcgcctcgatcgagggctactacttcaagccccggatggaccgcgagatcctc
gccgagcactccgagggcctcatcgcgaccaccggctgcccgagcggcgaggtgcagacg
cgcctgcgcctcgggcagtacaaggaggcgcgccaggcggccgccgactaccgcgacatc
ttcggcaaggagaactacttcgccgagatcatggaccacggcctcgagatcgagcgccgc
gtcatcggcgacgtcatccggctggcgaaggacctcgatctgccgctggtggccacgaac
gacctgcactacacccacgcgcacgacgccacctcgcacgcggcgctgctttgcgtgcag
tcgggcaccacgctcgacgaccccaagcgcttcaagttcgacgcggacgagttctacctc
aagtccccgcgcgagatgcgccaggtcttccgcgaccaccccgaggcctgcgacaacacc
ctgctgatcgccgagcgctgcgacgtgcagttcgacacctccgcgaactacatgccgcgc
ttccccgtccccgagggcgagaccgaggacacctggttcgtgaaggaggtcgaggccggc
ctgaacgagcgctacccggacgggatctcccaggaggtgcgcgatcgcgccgactacgag
acccgcgtcatcctgcagatgggcttccccggctacttcctcgtcgtcgccgacttcatc
aactggtccaagcgcaacggcatccgcgtcggcccgggccgcggctccggagccggctcg
atggccgcttacgcgatgaagatcaccgacctcgacccgctgaagcacggcctgatcttc
gagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgacgac
cgtcgccgcggcgaggtcatccgctacgtcaccgacaagtacggcgacgagcgcgtcgcg
cagatcgtcacctacggcaccatcaaggcgaagcaggcgctcaaggacgcctcgcgcgtg
ctcggcttcccgttcgggatgggcgagaagctcaccaaggcgatgccgcccgcgatcatg
ggcaaggacatcccgctgaccgggatcaacgaccccgagcacccgcgctacaaggaggcg
ctcgacgtccgcaacgtcatcgccgaggacccgcaggccaagctcgtcttcgagacggcc
ctgggcctggagaatctcaagcggcagtggggcgtgcacgcggccggtgtgatcatgtcg
agcgacccgctcaaggacatcatcccgatcatgaagcgggagcaggacggccagatcgtc
acgcagttcgactaccccgcgtgcgagtcgctcggcctgatcaagatggacttcctgggg
ctgcggaacctcacgatcatcgacgacgccctcgacaacatccgcgccaaccgcggtcag
gacctcgtcctcgaggacctcgcgctcgacgacccggcagcctacgagctgctggcccgc
ggcgacacgctcggcgtcttccagctcgacggcgggccgatgcgcgggctcctgcgcctg
atgaagcccgacaacttcgaggacatctccgcggtcctcgcgctctaccggccgggcccg
atgggtgccgactcgcacaccaactacgcgctgcggaagaacggcgtccaggagatcacc
ccgatccacccggagctcgaggagccgctcgccgaggtgctcggcggcacctacgggctg
atcgtctaccaggagcaggtgatgtcgatcgcgcagaagctcgcgggcttcacgctggcg
caggccgacctgctccgccgcgcgatgggcaagaagaagaagtccgagctggacaagcag
ttcgagggcttctccggcggcatggccgacaacggctactcgatggccgcggtgaagacc
ctctgggacatcctgctgcccttctccgactacgcgttcaacaaggcgcactcggccgcg
tacggcgtcatctcctactggaccgcctacctcaaggcgcacttccccgcggagtacatg
gccgcgctgctcaccagcgtcggcgactccaaggacaagatggccgcctacctcaacgag
tgccggcggatgggcatcaaggtgctgccgccggacgtcaacgagtcgatcggcttcttc
accgccgtggggcccgacatccgcttcggcctcggtgccgtccgcaacgtcgggaccaac
gtcgtcgagggcatccgggtcgcccgggaggagaaggggcgcttcgagtcgttccacgac
ttcctccgcaaggtgccgctcccggtcgcgaacaagcgcaccatcgagtcgctgatcaag
gcgggcgcgttcgactcgctcggctcgacgcggcgcgcgctcgtcgaggtgcacgaggac
gcggtcgaggccgccgtcggcgagaagcgcaacgaggccaacggccaggtcggcttcgac
ttcgacagcctctgggacgagccgcaggccgcgatccaggtgccgacccggccggagtgg
gccaagcgagacaagctcgccttcgagcgcgacatgctcggcctctacgtctccgaccac
ccgctcgccgggctcgagacggagctggccaagcactacagcacgacgatcgccgacctc
ctggtctcggagtcgatcggggacggcgagacggtggtcgtcgccggactcgtcacgagc
gtgcagcaccggatggcgaaggcctccggcaaccagtacgggatgatccaggtcgaggac
ttcggcggcgagatcacctgcatgttcatgggcaaggcgtaccaggagttcgctccggcg
ctgacgaacgactccatcgtcgtcgtgcgcggccgcgtcagcatgcgcgacgacgggatg
aacctgcacgcgttcagcctcttcgcccccgagatgagccaggacggcgactccggctcg
ctgaccgtctcgatgccggagtcgcgcgcgacgaccgacaccgtctcgcagctcagcgac
gtgctcatccgccactccggccgcaccgaggtccgcctcaagctgatcaagggcgacacg
gcccgcgtcttcgaggtcccgttcccggtccggatcaccccggacctgttcggcgagctg
aagtcgctgctcggtccgaactgcctgtactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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