KEGG   Rhizobium gallicum bv. gallicum: RGR602_CH01381
Entry
RGR602_CH01381    CDS       T03539                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rga  Rhizobium gallicum bv. gallicum
Brite
KEGG Orthology (KO) [BR:rga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rga03016]
    RGR602_CH01381 (rnd)
Enzymes [BR:rga01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     RGR602_CH01381 (rnd)
Transfer RNA biogenesis [BR:rga03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RGR602_CH01381 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AJD40738
UniProt: A0A0B4X2J9
Position
complement(1396083..1397228)
AA seq 381 aa
MIETTAELAAACKELATSDFITIDTEFLRETTFWPELCLIQMASLTTEVIIDPLAKGIDL
APFFELMANPNVLKVFHAARQDIEIIFHRGGLIPHPIFDTQVAAMVCGFGDSVSYDQLIS
RTKGVQIDKSSRFTDWSRRPLSEKQLDYALADVTHLRDAYIYLKAELEREGRSSWLSEEM
DILESRETYDMHPDDAWQRLKMRLRKPQELATVKYVAAWREREARSRNVPRSRVLKDDAI
YEIAQQQPKDTEALSRLRTIPKGWERSAAGTAVLEAVNAALALPKAEMPHVPRHTQAPEG
AAAAVELLKVLLKLISEKHGVAPKVIANSEDLDKIAADGEKAEVAALSGWRRELFGAPAL
QLIKGEIALRFVGKKVDTVSL
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgatagaaacaaccgccgaattggcggccgcctgcaaagagctggccacgtccgacttc
attacaatcgacactgaattcctgcgtgagacgacattctggccggagctttgcctgata
cagatggcgagcttgacgacggaagtcatcatcgacccacttgctaagggcatagacctt
gcaccctttttcgagttgatggccaacccgaatgtgctgaaggtttttcatgcggcgcgc
caggacatcgaaatcatcttccatcgcggcgggctgatcccgcatccaatcttcgacacg
caggtcgccgccatggtctgcggcttcggcgacagcgtttcctatgaccagctcatcagc
cggacaaagggcgtgcaaatcgataaatcctcccgcttcaccgactggagccgccggccg
ctttccgaaaagcagctcgattatgcgttggcagacgtcacacatctgcgcgacgcctat
atttatctcaaggccgaactggagcgcgaaggccgctcgtcctggctctcggaggagatg
gatattctcgaatcgcgcgagacctacgacatgcatccggatgacgcatggcaacgtttg
aagatgcggctgcgcaaaccgcaggaacttgcgaccgttaaatatgtcgcggcctggcgc
gagcgggaggcgcgatcccgcaacgtgccgcgttcacgcgtattgaaggacgatgcgatc
tacgagatcgcccagcagcagccgaaagacaccgaggccctgagccgcctgcgcacgatc
ccgaagggatgggagcgttctgccgccggtacggcggttctcgaagccgtcaatgcggcc
cttgccctgccgaaagccgagatgccccatgtgccccgccacacgcaggcgcctgagggt
gctgccgcggcggtggaattgctcaaggtactgttgaagctgatttcggaaaaacacggc
gtcgcgccgaaagtcatcgccaacagcgaagacctcgacaagattgccgcggacggcgag
aaggcggaggtggcggcactcagcggttggcgccgcgaattgttcggtgcgcccgcgctg
cagcttatcaagggcgagatcgcgcttcgtttcgtcggcaagaaagtcgataccgtttcg
ctttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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