KEGG   Rubrivivax gelatinosus: RGE_21240
Entry
RGE_21240         CDS       T01803                                 
Symbol
pyc
Name
(GenBank) pyruvate carboxylase Pyc
  KO
K01958  pyruvate carboxylase [EC:6.4.1.1]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge00020  Citrate cycle (TCA cycle)
rge00620  Pyruvate metabolism
rge01100  Metabolic pathways
rge01120  Microbial metabolism in diverse environments
rge01200  Carbon metabolism
rge01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:rge00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    RGE_21240 (pyc)
   00620 Pyruvate metabolism
    RGE_21240 (pyc)
Enzymes [BR:rge01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.1  pyruvate carboxylase
     RGE_21240 (pyc)
SSDB
Motif
Pfam: PYC_OADA CPSase_L_D2 Biotin_carb_N Biotin_carb_C HMGL-like Biotin_lipoyl ATP-grasp Dala_Dala_lig_C Biotin_lipoyl_2 HlyD_3 HlyD_D23 DUF3182 DUF2118
Other DBs
NCBI-ProteinID: BAL95465
UniProt: I0HR28
Position
complement(2220649..2224137)
AA seq 1162 aa
MEFRPIRSILIANRSEIAIRVMRAASEMRMRTVAIYSQQDRQALHRFKADESYLVGEGKK
PLEAYLDGDDILRIARRAGVDAIHPGYGFLSENPEFAERVIAAGLRWIGPSPEVMRVLGN
KVAARHAAVAAGVPVMPATPPLPREVDECRRLAEQIGFPVMLKASWGGGGRGMRVVESAA
ELPAALESARREALAAFGNDEVYFEKLIRRARHVEVQILGDRHGNLVHLHERDCTVQRRN
QKVVERAPAPYLDGAARAELCDSALRLMRSVGYTHAGTVEFLMDADTGRCWFIEVNPRIQ
VEHTVTEMITGVDIVKAQIRVTEGAWIGVGDDDPARPSAGVPPQAQIPLNGHALQCRVTT
EDPENGFLPDYGAIAAYRSAAGFGIRLDAGTAYGGAVITPYYDSLLVKVTAWAPTAGETI
QRMDRALREFRVRGLATNLQFLENVINHPKFAAGDVTTRFIEQTPELLAFAARRDRATKL
LRFLGEVTVDGNPEVRGRALPELPLPKPVLPRVDDETPPPPGTRQLLQQLGAKGFADWML
AQKRVLMTDTTMRDAHQSLLATRMRTADMLPIAPYYARELSGLFSLECWGGATFDVAMRF
LKEDPWERLAALRTRVPNVLFQMLLRGSNAVGYTNYADNVVQQFVRTAAREGIDLFRVFD
SLNWVENMRVAIDAVLDSGALCEGAICVTGDPFDPARAKYDLGYYVKTARALQQAGVHVL
GIKDMAGICRPRAAAALVKAIKEETGLPVHFHTHDTSGAAAASVLAAIEAGCDAVDGALD
AMSGLTSQPNLSSIAAALAGTDRDPGLPQDALHAASMYWEGVRRFYSPFESEIRSGTADV
YRHEMPGGQYTNLREQARALGLAHRWTEVSRAYADVNRLFGDIVKVTPTSKVVGDMALMM
VAQDLTPADVADPARDIAFPESVVSLFRGELGFPPDGFPEALSRKVLKLAPEAAPPAPYR
PGDRIPPVDLDAAREKAERDCGVKLDDRGLASWLMYPKVAREYHEHLRRYGDVSMLPTPV
FFYGPQPQQEIAVEIDPGKSLLVMLQSVAADGDTAHKVQFELNGQARTVRVPRAGVQAAA
ARPMAEPGNPWQVAAPMPGAIVSVAVAPGQRVAAGDTLLALEAMKMETHVAADRDAVVEA
VHVKPGERVQAKELLILLKPAD
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggagtttcgtccgatccggtccatcctgatcgccaaccggtccgagatcgcgatccgc
gtgatgcgcgcggccagcgagatgcgcatgcgcacggtggcgatctattcgcagcaggac
cgccaggcgctgcaccgcttcaaggccgacgagagctatctcgtcggcgaaggcaagaag
ccgctggaggcctacctcgacggcgacgacatcctgcgcatcgcgcgccgcgccggcgtc
gacgccatccaccccggctacggcttcctgtcggagaaccccgagttcgccgaacgcgtg
atcgccgccggcctgcgctggatcgggccttcgcccgaggtgatgcgcgtgctgggcaac
aaggtcgccgcgcgccacgccgcggtggccgccggcgtgccggtgatgccggcgacgccg
ccgctgccgcgcgaggtcgacgaatgccgccgcctggccgagcagatcggcttcccggtg
atgctgaaggccagctggggcggcggtggccgcggcatgcgcgtcgtcgaaagcgcggcc
gagctgccggcggcgctggagtcggcgcggcgcgaggcgctggccgccttcggcaacgac
gaggtctatttcgagaagctgatccgccgcgcgcgccacgtcgaggtccagatcctcggc
gaccggcacggcaacctggtgcacctgcacgagcgcgactgcaccgtgcagcgccgcaac
cagaaggtcgtcgagcgcgccccggcgccctatctcgacggcgcggctcgcgccgagctc
tgcgacagcgcgctgcggctgatgcgttcggtcggctacacgcacgccggcacggtcgag
ttcctgatggacgccgacaccggccgctgctggttcatcgaggtcaacccgcgcatccag
gtcgagcacacggtgaccgagatgatcactggcgtcgacatcgtcaaggcccagatccgg
gtcaccgaaggcgcctggatcggcgtcggcgacgacgacccggcgcgcccgtcggccggc
gtgccgccgcaggcgcagatcccgctcaacggccacgcgctgcagtgccgcgtgacgacc
gaggaccccgagaacggcttcctgcccgactacggcgccatcgccgcctaccgcagcgcc
gccggtttcggcatccggctggacgccggcacggcctacggcggcgccgtcatcacgccc
tattacgactcgctgctggtcaaggtgaccgcctgggcgccgaccgccggcgaaacgatc
cagcgcatggaccgcgcgctgcgcgagttccgcgtgcgcgggctggcgaccaatctgcag
ttcctcgagaacgtcatcaaccacccgaagttcgccgccggggacgtgacgacgcgcttc
atcgagcagacgcccgagctgctggctttcgccgcgcgccgcgaccgcgcgaccaagctg
ctgcgtttcctcggcgaggtcacggtcgacggcaaccccgaggtgcgcggccgcgcgctg
cccgaactgcctctgcccaagccggtgctgccgcgggtcgacgacgaaacgccgccgccg
cccggcacgcgccagttgctgcagcaactgggcgccaagggcttcgccgactggatgctg
gcgcagaaacgtgtgctgatgaccgacacgacgatgcgcgacgcgcaccagtcgctgctg
gccacgcgcatgcgcaccgccgacatgctgccgatcgcgccgtactacgcccgcgaactg
tcgggcctgttctcgctggagtgctggggcggcgcgaccttcgacgtcgcgatgcgcttc
ctgaaggaagacccgtgggagcgcctggcggcgctgcgcacgcgcgtgcccaacgtgttg
ttccagatgctgctgcgcggctccaacgccgtcggctacacgaactacgccgacaacgtc
gtgcagcagttcgtgcgcaccgcggccagggaaggcatcgacctgttccgcgtcttcgac
tcgctgaactgggtcgagaacatgcgcgtcgcgatcgacgccgtgctcgacagcggcgcg
ctctgcgaaggcgcgatctgcgtcaccggcgatcccttcgacccggcgcgcgccaagtac
gacctcggctactacgtgaagaccgcgcgtgcgctgcagcaggccggcgtgcacgtgctg
ggcatcaaggacatggccggcatctgccggccgcgtgccgccgcggcgctggtcaaggcg
atcaaggaagaaaccgggctgccggtgcacttccacacccacgacaccagcggcgccgcc
gcggcctcggtgctggcggcgatcgaggccggctgcgacgcggtggacggcgcgctcgac
gcgatgagcgggctgacctcgcagcccaacctgtcctcgatcgccgcggcgctggccggc
accgaccgcgaccccggcctgccgcaggacgcgctgcacgcggcgtcgatgtactgggag
ggcgtgcgccgcttctattcgcccttcgagtcggagatccgctccggcaccgccgacgtc
tatcgccacgagatgcccggcggccagtacaccaacctgcgcgagcaggcgcgtgcgctg
ggcctggcgcaccgctggaccgaggtctcgcgcgcctatgccgacgtcaaccggctcttt
ggcgacatcgtcaaggtgacgccgacctccaaggtcgtcggcgacatggcgctgatgatg
gtcgcccaggacctgacgccggccgacgtcgccgacccggcgcgcgacatcgccttcccc
gagtcggtggtctcgttgttccgcggcgagctcggcttcccgcccgacggtttccccgag
gcgctgtcgcgcaaggtgctgaagctggcgcccgaggccgcgccgccggcgccctaccgc
cccggcgaccgcattccgccggtggacctggacgcggcgcgcgagaaggccgagcgcgac
tgcggcgtcaagctcgacgatcgcggcctggcctcctggctgatgtacccgaaggtggcg
cgcgagtaccacgagcatctgcggcgctacggcgacgtctcgatgctgccgacgccggtg
ttcttctacggccctcagccgcagcaggagatcgccgtcgagatcgacccgggcaagtcg
ctgctggtgatgctgcagagcgtcgccgccgacggcgacaccgcgcacaaggttcagttc
gaactcaacggccaggcgcgcacggtgcgtgtgccgcgcgccggcgttcaggctgccgcc
gcgcggccgatggccgagccgggcaacccctggcaggtggcggcaccgatgcccggcgcc
atcgtcagcgtcgccgtcgcgccgggccagcgcgtggccgccggcgacacgctgctggcg
ctggaggcgatgaagatggagacccacgtcgccgccgaccgcgacgccgtcgtcgaggcg
gtgcacgtcaaaccgggcgagcgtgtgcaggccaaggagctgctgatcctgctgaagccg
gcggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (46)   

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