KEGG   Rubrivivax gelatinosus: RGE_27610
Entry
RGE_27610         CDS       T01803                                 
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B RluB
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
rge  Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:rge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rge03009]
    RGE_27610 (rluB)
Enzymes [BR:rge01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     RGE_27610 (rluB)
Ribosome biogenesis [BR:rge03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RGE_27610 (rluB)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Ub-Mut7C
Other DBs
NCBI-ProteinID: BAL96100
UniProt: I0HSW3
Position
complement(2923795..2925804)
AA seq 669 aa
MSSNDAESTPDPIAAVPPADEAPPKKRRAPRKKAEAPAADVAPAAEAVAAPEAPAPEAAA
EPAAEAKPRRRRTTKKAAAAEAPAAEPVAVVESLPAAAAERAPEPAPTVVPAEAPPRAEP
APAPEHAAEPSAEPAGEGADAAPAEAGAEGDAPRRSRNRRRGRRGERAERAPRDAAAPAA
EGEDVAGDDEAPETAPAPQLPPADVGEVFASVLSGVWDAEAGDEAPPLPAKRVLAPEPDA
PKLHKVLAQAGIGSRRDMEQMILEGRITVNGEPAHIGQRIAAGDRIAVGGKPVRYRIAPP
PTRVIAYHKPAGEVVTHDDPQQRPTVFRRLPKLHQGKWQSVGRLDINTEGLLLFTNSGEL
ANQLMHPRFGVEREYAVRSLGGLDDAARQKLLEGVEIDGQRCGFKSIENGGGEGANQWYR
CVITEGRNREVRKLFDAVGHAVSRLIRIRYGSVVLPKGLKRGVWVDLSEQDVRSLRRMTG
VGERPEGEQRDAGGDRRGKRGKRGRGGNAPESAPRGPKPQRREAGEAAIPNPLQQTFDKR
AIQQERQRRREIPEDGPIPNPLQQTYDKRGLQRDRPVRDLGEDGPIPNPLQQTYDKRFVQ
KPKPLAGGRGARGPKKGGAGGQPDPMQTSVGYIGGDAFLRKANGGGGRGGPRGGRGGGGG
GGGGRRGGR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgagctcgaacgacgccgaatccacgccggacccgatcgccgccgtgcctcccgccgac
gaggcgccgccgaaaaagcgccgcgcgccgcgcaagaaggccgaggcgcccgccgccgac
gtcgcgccggcagccgaggccgttgcggctcccgaggcgcccgcgcccgaggccgcggcc
gaacccgccgccgaagccaagccgcgccgccggcgcacgacgaagaaggccgccgccgcc
gaggcgccggcggccgagcctgtggccgtcgtcgagtcgctgccggccgccgctgccgag
cgcgcgcccgagccggcgccgacggtggttccggccgaagcgccgccgcgcgccgagccc
gcccccgcgccggaacacgcggccgaaccgtctgccgagccggcaggcgagggcgccgac
gccgcgccggccgaagccggcgccgaaggcgacgccccgcgccgcagccgcaaccgccgt
cgtggccgccgtggcgagcgcgccgaacgtgcgccgcgcgacgccgccgccccggccgcc
gagggcgaagacgtcgccggcgacgacgaggcccccgagaccgcgccggcgccgcaactg
ccgccggccgacgtcggcgaggtcttcgccagcgtgctgtcgggcgtctgggacgccgaa
gccggcgacgaagcgccgccgctgccggccaagcgcgtgctcgcgccggaacccgacgcg
cccaagctgcacaaggtgctggcccaggccggcatcggctcgcgtcgcgacatggagcag
atgatcctggaagggcgcatcaccgtgaacggcgagccggcgcacatcggccagcgcatc
gccgccggtgaccgcatcgccgtcggcggcaagccggtgcgctaccgcatcgcgccgccg
ccgacccgcgtcatcgcctatcacaagccggccggcgaggtcgtcacccacgacgacccg
cagcagcggccgacggtcttccgccgcctgcccaagctgcaccagggcaagtggcagtcg
gtcggccgcctggacatcaacaccgaaggcctgctgctgttcaccaactccggcgaactg
gccaaccagctgatgcacccgcgcttcggcgtcgaacgcgagtacgccgtgcgttcgctc
ggcggcctggacgacgccgcgcgccagaagctgctcgaaggcgtcgagatcgacggccag
cgctgcggcttcaagagcatcgagaacggcggcggcgaaggcgccaaccagtggtaccgc
tgcgtcatcaccgaaggccgcaaccgcgaggtgcgcaagctcttcgacgccgtcggccac
gcggtgagccggctgatccgcatccgctacggctcggtcgtgctgcccaaggggctcaag
cgcggggtctgggtcgacctgagcgagcaggacgttcgttcgctgcgccgcatgaccggc
gtcggcgagcgtcccgagggcgagcagcgcgatgccggcggtgatcgccgcggcaagcgc
ggcaagcgcggccgtggtggcaacgcccccgagagcgcgccgcgcggcccgaagccgcag
cgccgcgaagccggcgaggccgcgatcccgaatccgctgcagcagaccttcgacaagcgc
gcgatccagcaggaacgccagcgccgccgcgagatccccgaggacggcccgatcccgaat
ccgctgcagcagacctacgacaagcgtggcctgcagcgcgaccggccggtgcgtgacctc
ggcgaggacggcccgatccccaacccgctgcagcagacctacgacaagcgcttcgtgcag
aagcccaagccgctggccggcggccgtggcgcgcgcggcccgaagaagggtggcgcgggc
ggccagcccgacccgatgcagacctcggtcggctacatcggcggcgacgccttcctgcgc
aaggccaacggcggcggtggccgcggcggtccgcgtggcggccggggtggtggtggcggc
ggcggcggtggtcgccgcggcgggcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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