KEGG   Roseomonas gilardii: RGI145_03730
Entry
RGI145_03730      CDS       T04615                                 
Name
(GenBank) double-strand break repair helicase AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
rgi  Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:rgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rgi03400]
    RGI145_03730
Enzymes [BR:rgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RGI145_03730
DNA repair and recombination proteins [BR:rgi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     RGI145_03730
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: APT56347
UniProt: A0A1L7AC22
Position
1:complement(855634..859113)
AA seq 1159 aa
MNIPLSARERAQNAQRLASDPRLSAWVGASAGSGKTKVLTDRVLRLLLREGTEPGRILCL
TFTKAAAAEMAIRLNRRLGRWAVTDDADLRGEIEALTGEPVPPAQLATARKLFCRVLEQP
GGMRIATIHAFCQSLLRSFPLEADLPPQFAMLEDADSATLLAEAREAALSGGRVPPETLA
ALARLVTADRIAEALREMAGRREKLAALFETPGGALALGRRLGQRLGLPDGEREEDLAAL
ICDIPPAVAEQAKALLAYKTKTARDLGQRMLDLLALPPEERAARQAEWWDCLHTGKGELR
KALEPFDVLAAESARLKSFQERANAHRLLAATSALLVAAGPVLSDYAARKRRMGALDFDD
LIHHAQRLLRDPGSAWVLFKLDGGLDHILLDEAQDTNPAQWGIAEALAEEFFAGDGAREA
GERTLFVVGDEKQSIYGFQGADAQGFATWEARFSQQVRQAGGNFQPVALDVSFRSCAPVL
QLVDSVFHEGAARAGVVRPDGEPLHHFPDRAGHAGSVEVWPLLARGATEDPEPWFVPSQP
VVAQDADALLAETLAARIDHMVRHETLPARGDRPIRPGDIMILVRRRTRLTELLVRQLKR
RGVTVGGVDRIALVEQIAVQDMLALCDVLLLPEDDLQLAALLKSPLVGLEEDALFALAHD
RDGPLWHRLLQHRGALTAEGRAADWIATLADRADLVTPHALLSEVLGEHGGRAKLLERLG
GDAADALDELLNAALRYESRHPPSLQGFTHWLRRGGAEVKREAENAGDAVRILTAHGAKG
LQAPVVIIPDVGRGGRNSPLRWEEDSSLPHGSLPLWAPRKEFQARAWQEAERRRAEADAE
EENRLLYVALTRAEDRLLLCGLEPKKAVETSWHALVRQGIARCDGVAEEEFDPAAFGGPA
GTGFSGPLYRLTSAQTAEPRPDREGAGRVLPAALPAWAHHPAPSEASEDPVAPSRLAGEE
TEPPAAAPHGQRDPSGRRFRRGTLIHALLQHLPEHAEADREAVAQRHLARPGHGLSPEEQ
GATRDEVMRVLRHPALADAFGPGSLAEAPLAGRIGGVTVAGQVDRLWIGDDRIVVADYKT
NRPPPDRVEDVSPAYLRQMAAYRAVLRAAWPGRRIECVLVWTWSGAVMPLPEALLDRNLP
QALSPIQDASRTPSSPDRA
NT seq 3480 nt   +upstreamnt  +downstreamnt
ttgaacatccccctctccgcgcgcgaacgcgcccagaacgcacagcgtcttgcctccgat
ccgcgcctgtccgcctgggtgggcgcctcggccggttccggcaagaccaaggtgctcacc
gaccgcgtgctgcgcctcctgctgcgggagggcacggagcccggccgcatcctctgcctc
accttcaccaaggcggcggcggcggagatggcgatccgcctcaaccggcgcctgggccgc
tgggccgtcaccgacgacgccgacctgcgcggggagatcgaggcgctgaccggcgagccc
gtgccgcccgcgcagctcgccaccgcgcgcaagctgttctgccgcgtgctggaacagccc
ggcgggatgcggatcgccacgatccacgccttctgccagtcgctgctgcgctccttcccg
ctcgaagccgacctgccgccgcaattcgccatgctggaggacgcggattccgctaccctg
ctggcggaggcgcgggaggccgcgctgtccggcggccgcgtgccgccggaaaccctggcc
gccctggcccgcctcgtcaccgccgaccggatcgccgaggcgctgcgcgagatggcgggg
cggcgggagaagctggccgcgctgttcgagacgcccggcggcgcgctggcgctggggcgg
aggctgggccagcgcctcggcctgccggatggggagcgcgaggaggacctggcggcgctg
atctgcgacatcccgccggcggtcgcggaacaggccaaggcgctgctcgcctacaagacc
aagacggcgcgcgacctcgggcagaggatgctcgatctcctcgccctgccgccggaggaa
cgcgcggcgcggcaggcggaatggtgggactgcctgcacaccggcaagggcgagttgcgc
aaggcgctggagcccttcgacgtgctggcggcggaatccgcgcggctgaaatccttccag
gaacgcgccaacgcgcaccgcctgctggccgccaccagcgcgctgctggtcgccgccggg
ccggtgctgtccgactacgccgcccgcaagcgccgcatgggcgcgctggacttcgacgac
ctgatccatcacgcgcagcgcctgctgcgcgatcccggctcggcctgggtgctgttcaag
ctggatggcggcctcgaccacatcctgctcgacgaggcgcaggacaccaacccggcacaa
tggggcatcgccgaggcgctggccgaggaattcttcgccggcgacggcgcgcgcgaggcc
ggggagcgcacgctcttcgtggtgggcgacgagaagcagtcgatctacggcttccagggt
gccgacgcgcagggcttcgccacctgggaggcgcgcttttcccagcaggtgcggcaggcc
ggcggcaacttccagccggtggcgctggatgtgagcttccgctcctgcgcgcccgtgctg
caactcgtcgattccgtcttccacgaaggcgccgcgcgggctggcgtggtgcgtccggat
ggcgagccgctgcaccacttccccgaccgcgccggccatgccggcagcgtcgaggtctgg
cccctgctcgcgcgcggcgccaccgaggacccggagccctggttcgtgcccagccagccg
gtggtggcgcaggatgccgacgcgctgctggccgagaccctcgcggcgcgcatcgaccac
atggtgcgtcacgagaccctgccggcgcgcggcgaccgcccgatccgccccggcgacatc
atgatcctggtccgccgccgcacccggctgacggagttgctggtgcgccagctcaagcgg
cgcggcgtgacggtgggcggcgtggaccgcatcgcgctggtggaacagatcgcggtgcag
gacatgctggcgctctgcgacgtgctgctgctgccggaggacgacctgcaactggcggcg
ctgctgaaatcgccgctggtcgggctggaggaggacgcgctcttcgccctcgcccatgac
cgcgacggcccgctctggcaccgcctgctccagcaccggggcgcactgacggcggagggc
cgggctgccgactggatcgccaccctggccgaccgcgccgatctggtcacgccgcatgcg
ctgctgagcgaggtgctgggcgagcatggcggccgcgcgaagctgctggaacgcctgggc
ggcgacgcggcggatgcgctggacgagttgctgaacgccgcgctgcgctacgagagccgc
cacccgccctctcttcagggcttcacccactggctgcgccgcggcggcgcggaggtgaag
cgcgaggcggagaatgccggcgacgccgtgcgcatcctcaccgcgcatggcgccaagggc
ctccaggcgccggtggtgatcatccccgatgtcgggcgcggcggccgcaactcgccgctg
cgctgggaggaggacagctccctcccccatggctcccttcccctttgggcgccgcgcaag
gagttccaggcccgcgcctggcaggaggccgagcgccgccgcgccgaggccgatgccgag
gaggagaaccgcctgctctacgtggcgcttacccgcgccgaggaccggctgctgctctgc
gggctggagccgaagaaggcggtggagacgagctggcacgcgctggtgcgccagggcatc
gcccgctgcgacggcgtggcggaggaggagttcgaccccgcggccttcggcgggccggcc
gggacgggcttctccggcccgctctaccgcctcacctccgcccagaccgccgaaccccgc
ccggaccgcgaaggcgcaggccgggtgctgcccgccgcgctgccggcctgggcgcatcat
cccgccccatccgaggcctcggaggacccggtggcgccgtcgcgcctcgcgggcgaggag
accgagccgcccgccgccgcgccgcacgggcagcgggacccctccggccgccgcttccgg
cgcggcacgctgatccatgccctgctgcaacacctgccggagcatgccgaggccgatcgc
gaggcggtggcgcaacgccatctcgcgcggcccgggcacgggctttcaccggaggagcag
ggagcgacccgcgacgaggtgatgcgggtgctgcgccaccccgccctggcggacgccttc
ggccccggcagcctggcggaagcgcccctcgccggccgcatcggcggcgtgacggtggcg
gggcaggtggaccggctctggatcggggacgaccggatcgtggtggcggactacaagacc
aaccgcccaccgcccgaccgggtggaggacgtgtcgcccgcctatctgcggcagatggcg
gcctaccgcgccgtgctgcgggccgcctggccggggcggcggatcgaatgcgtgctggtc
tggacctggtccggcgccgtgatgccgctgccggaggcgctgctggaccgtaacctcccg
caggccctttcgcccatccaggacgcatcccggacgccctcgtctccggaccgggcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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