KEGG   Piscinibacter gummiphilus: A4W93_09585
Entry
A4W93_09585       CDS       T04831                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
rgu  Piscinibacter gummiphilus
Pathway
rgu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4W93_09585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rgu03400]
    A4W93_09585
DNA repair and recombination proteins [BR:rgu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4W93_09585
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4W93_09585
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind nSTAND1 AAA_16 DnaJ_CXXCXGXG DUF4350 AAA_29 AAA_21 AAA_33 DUF5351
Other DBs
NCBI-ProteinID: ARN20142
UniProt: A0A1W6L7D8
Position
complement(2116555..2119059)
AA seq 834 aa
MDRHPLDRFVRVRGAREHNLRGVDVDIPRDALVVFSGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRFIDQVGVPAVDAIEGLPPAIALQQQRGTPGARSSVGSVTTLSNLLRMLYSR
AGTYPAHQPMLHAEDFSPNTPQGACPSCHGLGRVYDATERSMVPDDSLTIRERAVAAWPL
AWHGQNLRDILVTLGHDVDVPWRDLPKKVRHWILFTDEQPTVPVYPGFTPAETRAALRRK
TEPAYQGTFTSARRHVLHTFATSQSPLMKRRAAQYLAASDCPVCHGKRLKPESLSVTFGG
LDIAELSQLPLDRLGDVLTGGGEGLVTGLTEERQVAAQRIATDVLDRVHLLRDLGLGYLS
LDRATPTLSPGELQRLRLATQIRSNLFGVVYVLDEPSAGLHPGDGEALRRALGRLREAGN
TLFVVEHDLDLMRHADWLVDVGPDAGELGGTVLYSGPPEGLRGVAASHTAKYLFEPPPAR
ARPARAARGWLRLEGITRNNLQGLDAAFPLGTFCAVTGVSGSGKSSLVSQALVDLVATHL
GQDAPPPADDESDEPEVRVATRGRLRGDTAAVRRLVQVDQKPIGRTPRSNLATYTGLFDP
VRKLFAATPAARSRKYDAGRFSFNVPKGRCETCEGEGFVSVELLFLPSVYAPCPTCHGAR
YNTATLKVTLRGKTIADVLHMTVDEALAFFAEDAAVERPLRLLQQIGLGYLRLGQPATEL
SGGEAQRIKLATELQRVQRGDTLYVLDEPTTGLHAADVDRLMAQLHGLVEAGNTVVVVEH
EMRVVAGSDWVVDIGPGAGSAGGRIVAAGTPEQVAAAPDSVTAPFLAKALPSAD
NT seq 2505 nt   +upstreamnt  +downstreamnt
atggaccgacatcccctcgaccgattcgtgcgcgtgcgcggcgcacgcgaacacaacctc
cgcggcgtcgacgtggacatcccccgcgacgccctcgtcgtcttcagcggcgtctcgggc
tcgggcaagtcgtcgctcgccttcggcaccctctacgcggaagcgcagcggcgctacttc
gagtcggtggcgccgtacgcccggcgcttcatcgaccaggtgggcgtgcccgccgtcgac
gccatcgagggcctgccgccggccatcgcgctgcagcagcagcgtggcacgccgggcgcg
cgctcgtcggtgggcagcgtcaccaccctctcgaacctgctgcgcatgctgtactcgcgg
gccggcacctacccggcgcaccagccgatgctgcacgcggaggacttctcgcccaacacg
ccgcagggcgcgtgcccgtcctgccacggcctcggccgcgtgtacgacgccaccgaacgc
tcgatggtgcccgacgactcgctgaccatccgcgagcgcgccgtggccgcctggccgctc
gcgtggcacgggcagaacctgcgggacatcctcgtgaccctcggccacgacgtggacgtg
ccctggcgcgacctgccgaagaaggtgcgccactggatcctgttcaccgacgagcagccc
accgtgcccgtgtacccgggcttcacgccggccgagacccgcgccgcgctgcgccgcaag
accgagccggcgtaccagggcacgttcacgagcgcgcgccgccacgtgctgcacaccttc
gccacgtcgcagagcccgctgatgaaacgccgcgcggcgcagtacctcgcggcctccgac
tgtccggtgtgccacggcaagcggctcaagcccgaatcgctctcggtgaccttcggcggg
ctcgacatcgcggagctgtcgcaactgcccctggaccgcctcggcgacgtgctgaccggc
ggcggcgaaggcctcgtcacgggcctcaccgaggagcggcaggtggccgcgcaacgcatc
gccaccgacgtgctcgaccgcgtgcacctgctgcgcgacctcggcctcggctacctgtcg
ctcgaccgcgccacgcccacgctgtcccccggtgagctgcagcgcctgcggctcgccacg
cagatccgctcgaacctgttcggcgtggtctacgtgctcgacgaaccctcggccggcctg
cacccgggcgacggcgaggccctgcgccgcgcgctcgggcgcctgcgcgaggcgggcaac
acgctgttcgtggtggaacacgacctcgacctgatgcgccacgccgactggctcgtcgac
gtggggcccgacgcgggcgaactcggcggcaccgtgctctacagcgggccgccggagggc
ctgcgcggcgtggccgcgtcgcacaccgcgaagtacctgttcgagccccccccggcgcgc
gcgcggcccgcccgcgcggcgcggggctggctgcgcctcgagggcatcacgcgcaacaac
ctgcaggggctcgacgccgccttcccgctcggcacgttctgcgccgtgaccggcgtgtcg
ggctcgggcaagtcgagcctcgtgagccaggcgctggtggacctcgtcgcgacccacctg
ggccaggacgccccgccccccgccgacgacgagtccgacgaaccggaggtgcgtgtggcc
acgcgggggcgcctgcgcggcgacaccgccgcggtgcgccgcctcgtgcaggtcgaccag
aagcccatcgggcggacgccgcgttcgaacctcgcgacgtacacggggctcttcgacccg
gtgcgcaagctcttcgcggcgacaccggccgcccgctcgcgaaagtacgacgccggccgg
ttctcgttcaacgtgcccaagggccgctgcgagacctgcgaaggcgaaggcttcgtgagc
gtcgaactgctgttcctgccgagcgtctacgcgccctgtcccacgtgccacggcgcccgc
tacaacacggccacgctgaaggtgacgctgcgcggaaaaaccatcgccgacgtgctgcac
atgaccgtcgacgaggccctcgccttcttcgccgaggacgccgccgtcgagcggccgctg
cgcctgctgcagcagatcggcctcggctacctgcggctgggccagccggccacggagctg
tcgggcggcgaggcgcagcgcatcaagctcgcgaccgaactgcagcgcgtgcagcgcggc
gacacgctctacgtgctggacgaacccaccaccgggctgcacgcggccgacgtcgaccgg
ctcatggcccagctgcacggcctggtcgaggcgggcaacaccgtcgtggtggtcgagcac
gagatgcgggtggtggccgggagcgactgggtggtcgacatcgggccgggcgcggggagc
gccgggggccgcatcgtggcggccggcacgccggagcaggtggccgcggcgccggacagt
gtcacggcgccgttcctcgcgaaggcgctgccgtcagccgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system