KEGG   Piscinibacter gummiphilus: A4W93_14920
Entry
A4W93_14920       CDS       T04831                                 
Name
(GenBank) hypothetical protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rgu  Piscinibacter gummiphilus
Brite
KEGG Orthology (KO) [BR:rgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rgu03016]
    A4W93_14920
Enzymes [BR:rgu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     A4W93_14920
Transfer RNA biogenesis [BR:rgu03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    A4W93_14920
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: ARN21081
UniProt: A0A1W6L9V9
Position
complement(3353985..3354575)
AA seq 196 aa
MSDQMSLMGFDPPPVPTDRLFLALLPDAPARQSIAQAIEGLRADHGLTAKAVQPDKLHVT
LFHVGDFPGIPPGLLDKVHAAASQAARVAPFEVAFDRAASFSGRPGNRPFVLRGGEALAP
LVAFQKSLSDALARVNIVRKERVYTPHVTLLYDDPLVPEQAVAPVSWTVSEFVLIDSLMN
QPVKRYDVLARWPLSG
NT seq 591 nt   +upstreamnt  +downstreamnt
atgtccgaccagatgtccctgatgggattcgatcccccgccggtgcccaccgaccgcctg
ttcctcgcgctgctgccggatgcgcccgcgcgacagagcatcgcccaggcgatcgagggg
ctgcgggcggaccacgggctcactgccaaggccgtgcagccggacaagctgcacgtgacg
ctcttccacgtgggggacttccccggcatccctccgggcctgctcgacaaggtgcacgcc
gccgcgtcgcaggccgcgcgggtggcgccgttcgaggtcgcgttcgaccgggccgccagc
ttctcgggccggccgggcaaccggccgttcgtgttgcggggcggcgaggcgctcgcaccg
ctggtcgcgttccagaagtcgctgtcggatgcgctggcccgcgtcaacatcgtgcgcaag
gagcgcgtgtacacgccccacgtcacgctgctctacgacgacccgctggtgccggagcag
gccgtggcccccgtctcgtggacggtgtccgagttcgtgctgatcgacagcctgatgaac
cagccggtcaagcgctacgacgtgctcgcgcgctggccgctgtcgggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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