KEGG   Piscinibacter gummiphilus: A4W93_18110
Entry
A4W93_18110       CDS       T04831                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
rgu  Piscinibacter gummiphilus
Brite
KEGG Orthology (KO) [BR:rgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rgu03019]
    A4W93_18110
   03009 Ribosome biogenesis [BR:rgu03009]
    A4W93_18110
Messenger RNA biogenesis [BR:rgu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A4W93_18110
Ribosome biogenesis [BR:rgu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    A4W93_18110
SSDB
Motif
Pfam: RNase_T DUF2098
Other DBs
NCBI-ProteinID: ARN21653
UniProt: A0A1W6LBN6
Position
complement(4041802..4042377)
AA seq 191 aa
MTDTTSATPTLASSDQNLVWIDLEMTGLYPNTDRIIEIAVVVTDATLTQRVEGPVFAVHQ
SDATLDAMDAWNKGTHGKSGLIDRVKASTFDEAAAEAQVIEFLKQYVPKNTSPMCGNSIC
QDRRFLANYMPKLEAFFHYRNLDVSTLKELAKRWKPGILGGFKKAQAHTALADIHESIDE
LVYYRTHFLSL
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaccgacaccacctccgcgaccccgacgctggccagcagcgaccagaacctcgtctgg
atcgacctcgaaatgacgggcctgtacccgaacaccgaccgcatcatcgagatcgccgtc
gtcgtcaccgatgccacgctgacccagcgcgtcgagggcccggtgttcgccgtgcaccag
tccgacgccacgctcgacgcgatggacgcgtggaacaagggcacgcacggcaagagcggc
ctgatcgaccgggtcaaggcctccacgttcgacgaggccgcggccgaggcccaggtcatc
gagttcctgaagcagtacgtgccgaagaacacgtcgcccatgtgcggcaacagcatctgc
caggaccgccgcttcctcgcgaactacatgccgaagctggaagccttcttccactaccgc
aacctcgacgtcagcacgctcaaggaactggccaagcgctggaagccgggcatcctcggc
ggcttcaagaaggcccaggcccacacggcgctggccgacatccacgaatccatcgacgaa
ctggtgtactaccgcacgcacttcctgtccctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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