KEGG T03776: NY08

Rhodococcus sp. B7740: NY08_1006

Entry

NY08_1006         CDS       T03776

Name

(GenBank) Pup ligase PafA, component of postulated heterodimer PafA-PafA'

K13571

proteasome accessory factor A [EC:6.3.1.19]

Organism

rhb Rhodococcus sp. B7740

Brite

KEGG Orthology (KO) [BR:rhb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rhb03051]
    NY08_1006
Enzymes [BR:rhb01000]
6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.19  prokaryotic ubiquitin-like protein ligase
     NY08_1006
Proteasome [BR:rhb03051]
Prokaryotic proteasome
  Bacterial regulatory particles
   NY08_1006

SSDB

Motif

Pfam:

Pup_ligase

Other DBs

NCBI-ProteinID:

AJW39036

UniProt:

A0A0D5A863

Position

complement(1074706..1076049)

AA seq 447 aa
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLLQLVTHDRAGERVLEDLLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVQRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMAETSTMLKVGTAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYSRAVEHLKTREPNTQVEQVVDL
WGRTLDAIETQDFAKVDTEIDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAKRVTEDEQIDEAVDLPPQTTRAKLRGEFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM

NT seq 1344 nt +upstreamnt +downstreamnt
atgggcatcgagacagagttcggtgtcacatgtactttccacggacatcgacggctgagt
ccggacgaagtggctcgctatctgttccgccgagtcgtttcgtggggtcgcagctcgaat
gtgtttcttcgcaacggagcccgcctgtacctcgacgtgggctcgcatcccgagtacgcc
accgccgagtgcgacagtctgttgcagctggtaacccacgaccgcgcaggcgagcgggta
ctggaggacctgctgatagacgccgagcagcgcctggccgaagagggtatcggcggcgat
atctatctgttcaagaacaacaccgactcggcgggtaactcctacggctgccacgagaac
tttctcgtccaacgtgccggcgagttctcccgaatctcggacgttctgctgccgttcctg
gtcacgcgtcagttgatctgtggcgcgggcaaggtgctccagacgcccaaggctgcgacg
ttctgcctgtcgcagcgcgccgagcacatctgggaaggcgtctcctcggccaccactcgt
tcgcggccgatcatcaacacgcgcgacgagccgcacgccgacgccgagaagtaccgccga
ctgcacgtcatcgtgggcgactccaacatggccgagacctcgacgatgctcaaggtcggt
acggcagccctcgttctcgagatgatcgaggcgggcgtgtccttccgagatttcgcgctg
gacaatccgattcgcgcaatccgcgaggtcagtcacgatctcaccggacgtcgccccgtt
cgactcgccgggggacgacaggccagcgccctcgatatccagcgcgagtactactcgcga
gccgtcgagcatctcaagacgcgcgagccgaacactcaggtggagcaggtcgtcgacctg
tggggacgaacgctcgacgccatcgagacacaggatttcgcgaaggtggacaccgagatc
gactgggtcatcaaacgcaaactgttccagcgttatcaggaccgttactcgatggagctg
tccgatcccaagatcgctcagctggacctcgcctaccacgacatcaagcgcggccgcgga
gtgttcgatctgttgcagcgcaaggggctggccaagcgagtcaccgaggacgagcagatc
gacgaggccgtcgatctgccgccgcagaccaccagggccaagctgcgcggagaattcatc
acggccgctcaggaagcgggtcgcgacttcaccgtcgactgggtacacctgaagttgaac
gaccaggctcagcgaaccgtgctctgcaaagacccgttccgatcggtcgacgagcgagtg
gaacggttgatcgcgtcgatgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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