KEGG   Rhodococcus sp. B7740: NY08_3421
Entry
NY08_3421         CDS       T03776                                 
Name
(GenBank) Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
rhb  Rhodococcus sp. B7740
Pathway
rhb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NY08_3421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhb03400]
    NY08_3421
Enzymes [BR:rhb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     NY08_3421
DNA repair and recombination proteins [BR:rhb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     NY08_3421
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AJW41431
UniProt: A0A0D5AEZ8
Position
complement(3534955..3535731)
AA seq 258 aa
MMGVMRIGAHVRDSSDPLGTAEALGVDLVQMFLTDPQKWNKLSPHPQGEALLTGDVDVVV
HSSYVLNVASLNNRIRIPSRKAVVEQAAAAAEIGAIGLVVHGGHVREGEDTAKGIDNWRK
LFERQAEQGGFAVPIFVENTAGGDSAMARHFDDIARLWDAIGEFGAGFCLDTCHAWAGGE
DLVDVVDRIKAITGRIDLVHLNNSRDEFDSARDRHANLGTGTIDAEILTAVALAADAPVI
LETPPEGIEDDVRLLKSL
NT seq 777 nt   +upstreamnt  +downstreamnt
atgatgggcgtcatgcgcatcggagcccacgtccgcgacagcagcgaccctctcggtacg
gccgaggcgctcggcgtcgacctcgtccagatgttcctcaccgatccgcagaagtggaac
aaactttccccgcacccccagggcgaggcgttgttgaccggcgacgtcgacgtggtggtg
cactcgtcctacgtgctcaacgtggcgagtttgaacaatcggatccgcattccctcgcgc
aaggccgtcgtcgagcaggctgctgctgcggccgagatcggggccatcggtctggtcgtc
cacggcggccacgttcgtgagggcgaggacaccgcgaagggaatcgacaactggcgcaag
ctgttcgagcgccaggcggagcagggtggcttcgccgtgccgatcttcgtcgagaacacc
gcgggcggagactccgcgatggcacgccacttcgacgacatcgcccggttgtgggacgcg
atcggtgaattcggtgccggattctgtctggacacctgccatgcgtgggccgggggcgaa
gatctggtcgacgtggtcgaccgaatcaaggccatcaccggacgaatcgatctggtgcat
ctgaacaattcacgcgacgaattcgactcggcgcgagaccggcacgcgaatctgggcacc
ggaacgatcgacgccgagatcctgacggccgtcgcgctggcggccgacgcgccggtgata
ctcgagactccgcccgaggggatcgaagacgacgtcaggctgctgaagagcctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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