KEGG   Rhodovulum sp. P5: RGUI_4102
Entry
RGUI_4102         CDS       T04813                                 
Name
(GenBank) Oligopeptide transport system permease protein OppB
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rhc  Rhodovulum sp. P5
Pathway
rhc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RGUI_4102
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rhc02000]
    RGUI_4102
Transporters [BR:rhc02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    RGUI_4102
SSDB
Motif
Pfam: ABC_tran oligo_HPY SMC_N AAA_16 AAA_29 AAA_21 AAA_22 Sigma54_activat nSTAND1 AAA_23 nSTAND3 DUF3987 Hpr_kinase_C NACHT PRK ATP-synt_ab AAA_33 Zeta_toxin Mg_chelatase DUF87
Other DBs
NCBI-ProteinID: ARE42243
UniProt: A0A1V0Q1H4
Position
4114471..4116075
AA seq 534 aa
MTAVLDIRGLSVSLPKHADRPYAVQDITFQVEKGEIVCVVGESGSGKSVTAFTVMGLHDR
RALTPTAGEILLEGENILADNDRRIRKLRGEKMAMIFQEPMTALNPVARVGDQIAEMLEI
HTDLSATERRKKVVAAMADVHLPDPEKMYDSYPHQLSGGQRQRIMIAMALVLEPVLLIAD
EPTTALDVTTQAQILVLIRELQERRGMGVLFITHDFGVVAEIADRVLVMQHGRVVEQGPV
AEVLGNPQHDYTKMLIGAVPSMEPPARAPARAAKVIEARHLDKRYGTKGLFGGGRVVHAA
QDVNFVVNRGETLGIVGESGSGKSTVARCVMRLIDPTSGGILINGEDIAALREGAMRDHR
RDIQIVFQDPYRSLNPRRTVGQSIVEGPMNFGIPAGEARHRAERLMRIVGLDPAALERFP
HQFSGGQRQRICIARALAMEPVALIADEAVSALDVSVQAQVLDLLEEVRKEFDLAMLFIT
HDLRVAAQVCDRIMVMQHGVVVESGPTADVYANPQHAYTRALLAAAPGHHMLDG
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgacggcggttctggatatccgcgggctgtctgtcagcctgcccaaacatgccgaccgg
ccctatgcggtgcaggacatcacctttcaggtcgaaaagggcgaaatcgtctgcgtcgtg
ggcgaatccggatcgggcaaatcggtgaccgccttcacggtcatgggcctgcacgaccgg
cgcgccctgacccccacggcgggcgagatcctgctggagggggagaacatcctcgccgac
aacgaccggcgcatccgcaagctgcgcggggaaaagatggcgatgatctttcaggagccg
atgacggccctgaaccctgtggcccgcgtgggcgaccagatcgccgagatgctggagatt
cacaccgacctgtccgcgacagagcgtcggaaaaaggtcgtcgccgcgatggccgacgtg
catctgcccgacccagaaaagatgtatgacagctatccgcatcagctttcgggcgggcag
cggcagcggatcatgatcgccatggcgctggtgctggaaccggttctgctgatcgcggac
gaacccaccaccgcgctcgacgtcacaacgcaggcgcagatcctcgtgctgatccgcgaa
ttgcaggaacggcgcggcatgggtgttctgttcatcacccatgatttcggcgtggtggcg
gaaatcgccgaccgggtgctggtgatgcagcacggccgggtggtcgagcagggcccggtg
gcagaggttctgggcaacccccagcacgattacaccaagatgctgatcggcgccgtcccg
tcgatggaaccgcccgcccgcgcgcccgcaagggccgccaaggtgatcgaggcgcggcat
ctggacaagcgctacgggaccaaggggctgttcgggggcgggcgcgtggtccatgcggcg
caggacgtgaacttcgtcgtgaaccggggggagacgctgggcatcgtcggcgaaagcggg
tctggcaagtccaccgtggcgcgctgcgtgatgcgcctgatcgacccgacctcgggcggg
atcctgatcaatggcgaggatatcgccgccctgcgcgagggcgcgatgcgcgaccatcgc
cgggacatccagatcgtgttccaggatccctaccgctcgctcaacccgcgccggacggtc
ggccagtccatcgtcgaggggccgatgaatttcggcatcccggcgggagaggcccggcac
cgcgccgaacggctgatgcggatcgtggggcttgaccccgccgcgctggaacggttcccg
caccagttttccggcgggcagcgacagcggatttgcatcgcccgtgccctggcgatggaa
cccgtggcgctgatcgcggatgaggccgtgtcggcgctggacgtctccgttcaggcgcag
gtgctggacctgctggaagaggtgcgcaaggagttcgatcttgccatgctgttcatcacc
catgacctgcgggtggccgcgcaggtctgcgaccggatcatggtgatgcagcacggggtg
gtggtggaaagcggccccacggccgatgtctatgccaacccgcagcacgcctataccagg
gcccttctggccgcggcgccgggccatcacatgctggacggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system