KEGG   Rhodanobacter denitrificans: R2APBS1_0347
Entry
R2APBS1_0347      CDS       T02495                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rhd  Rhodanobacter denitrificans
Pathway
rhd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R2APBS1_0347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhd03019]
    R2APBS1_0347
   03110 Chaperones and folding catalysts [BR:rhd03110]
    R2APBS1_0347
   03029 Mitochondrial biogenesis [BR:rhd03029]
    R2APBS1_0347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhd04147]
    R2APBS1_0347
Enzymes [BR:rhd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     R2APBS1_0347
Messenger RNA biogenesis [BR:rhd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     R2APBS1_0347
Chaperones and folding catalysts [BR:rhd03110]
 Heat shock proteins
  HSP60 / Chaperonin
   R2APBS1_0347
Mitochondrial biogenesis [BR:rhd03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    R2APBS1_0347
Exosome [BR:rhd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   R2APBS1_0347
  Exosomal proteins of other body fluids (saliva and urine)
   R2APBS1_0347
  Exosomal proteins of breast cancer cells
   R2APBS1_0347
  Exosomal proteins of colorectal cancer cells
   R2APBS1_0347
  Exosomal proteins of bladder cancer cells
   R2APBS1_0347
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AGG87523
UniProt: I4WHM1
Position
388705..390354
AA seq 549 aa
MAAKEVRFGEDARSRILKGVNTLANAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKYENLGAQIVKEAASKTSDVAGDGTTTATVLAQAFIQEGLKAVAAGMNPMDLKRGI
DKAVIAAVGELKKLSNPTANDKEIAQVGTISANSDTNIGDIIATAMKKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQQVELDDPYILIHDKKVSNVRELLPVLEAV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAILEDIAILTNGQV
VSEEVGLSLEKTTIGDLGRAKRIVITKENTTIIDGAGEAEKIQSRIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALRAVEGLKGDNTDQNLGIAITRRALEAPLRAIVANAGEEPSVVLNKVKEGKGNFGYNA
ATGEFGDMVEMGILDPTKVTRTALQHAASVAGLAITTEAIVAELPKKEEHNHGAGGMGGG
MGGMGGMDF
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggccgctaaagaagtccgcttcggcgaagacgcccgctcgcgcatcctcaagggcgtg
aacacgctcgccaatgccgtcaaggtcacgctcggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcccccacgatcaccaaggacggcgtgtccgtcgccaaggagatc
gagctggccgacaagtacgagaacctcggcgcgcagatcgtcaaggaagccgcctccaag
acctccgacgtcgccggtgacggcaccaccaccgccaccgtgctggcgcaggcgttcatc
caggaaggcctcaaggcggtcgccgccggcatgaacccgatggatctgaagcgcggcatc
gacaaggcggtcatcgccgccgtcggcgagctgaagaagctctccaaccccaccgcgaac
gacaaggaaatcgcccaggtcggtaccatctcggcgaactccgacaccaacatcggcgac
atcatcgccaccgcgatgaagaaggtcggcaaggaaggcgtgatcacggtcgaggaaggc
tcgggcctggagaacgagctggacgtggtcgaaggcatgcagttcgatcgcggctacctg
tcgccgtacttcatcaacaaccagcagagccagcaggtcgagctggacgatccgtacatc
ctgatccacgacaagaaggtctccaacgtccgcgagctgctgccggtgctggaagccgtc
gccaaggccggcaagccgctgctgatcgtggccgaggaagtggaaggcgaggcgctggcc
acgctggtggtcaacaccatccgcggcatcgtcaaggtcgccgccgtcaaggcgccgggc
ttcggtgaccgtcgcaaggcgatcctcgaggacatcgccatcctcaccaacggccaggtc
gtgtccgaggaagtgggcctgtcgctggagaagaccaccatcggcgacctgggtcgcgcc
aagcgcatcgtgatcaccaaggaaaacaccaccatcatcgacggcgccggcgaggcggag
aagatccagtcgcgcatcaagcagatcaaggcgcagatcgaggagacctcctccgactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggcggtgatcaag
gtcggtgccgccaccgaagtcgagatgaaggaaaagaaggcgcgcgtcgaagacgctttg
cacgcgacccgtgcggcagtcgaggaaggtgtggtccccggcggcggcgtcgcgctgatc
cgtgcgctgagggcggtcgaaggtctgaaaggcgacaacaccgaccagaacctcggcatc
gcgatcacccgccgcgcgctggaagcgccgctgcgcgcgatcgtcgccaacgctggcgaa
gagccgtccgtggtgctcaacaaggtcaaggaaggcaagggcaacttcggctacaacgcc
gccaccggcgagttcggcgacatggtcgagatgggcatcctggatccgaccaaggtgacc
cgcacggccctgcagcatgccgcgtcggtcgctggcctggcgatcaccaccgaggcgatc
gtcgccgagctgccgaagaaggaagagcacaaccacggcgccggcggcatgggcggcggc
atgggtggcatgggcggcatggatttctga

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