KEGG   Rhodanobacter denitrificans: R2APBS1_0638
Entry
R2APBS1_0638      CDS       T02495                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
rhd  Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rhd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhd02048]
    R2APBS1_0638
Enzymes [BR:rhd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     R2APBS1_0638
Prokaryotic defense system [BR:rhd02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   R2APBS1_0638
SSDB
Motif
Pfam: ResIII Tn7_TnsA-like_N Helicase_C
Other DBs
NCBI-ProteinID: AGG87806
UniProt: M4NJ24
Position
complement(707622..710561)
AA seq 979 aa
MADPIQPLALAAALTRRTEQLCIGLEQGIADLYELVTPVTAALLRWWFGEDACQSRTFNF
HPGQKQAILNVIVAHEVLASPNLKDLYQQVCADALLEGTRLADVAQDKHGHPKYCLKMAT
GTGKTWVLQALLVWQLLNKTAALDEGRDDPRFTRRFLIVAPGLIVYERLLDAFLGKENED
KSRDFASSDIASYAELFTPPARRERIAQFVRGNVCQKQEIGLKATGNGMIAITNWHLLSE
AEEEAEQEEAAWVDTPGMVADAARVAYDVLPLTPGRATGNSLDVLDRRWARGNVLSYLAD
LPDLMVFNDEAHHIHELKSGGETSEVEWQKSLSVIAAGKGRRFVQMDFSATPYNDVGSGR
KKAKLYFPHIVVDFDLKAAMRLGLVKSLVLDKRKELGALPLEFKAERDGDGNVALAEGQR
VMLRAGLQKLRKLEADFARLDPGRHPKMLVVCEDTTVSPLVARFLCEEGLHDDDVLTVDS
GRKAELGEKDWAPLRQRLFNVDRHAQPRVIVSVLMLREGFDVNNICVIVPLRSSQAQILL
EQTIGRGLRLMWRDPEYADIKRENRERINRGEEPGSLIDILSIVEHPAFQSFYDELMREG
LVGSTGDDDEGSSIGDLVAAELREGYEQYDFAIPFILREADDSVEHLPIDVAALPSFSAM
SRAKLAELLGKGDTFTSQDLQSSTLFGDYRVDGVAMDVSGYNELLSRLTRRVSQALSHPL
PKGNKVSPHLDRPYLQMNTAALATALDDYIRERLFGEVFEPFEGEGWRLLLLQPVLDHIV
KIFALALVRAEEHTVRGSTEVHHRRLSEVTKLMVRESASLEVSKCIYTRLPYPTRSGGLE
RAFIEWAQADAGIEAFCKISENRHDFARLRYIKDDGLPAFYIPDFLVRTNDAIYLVETKA
QQQVGHPNVQRKLKAATTWCERINALDAEQRGGRVWHYALVGESLFYDWREKGARLGELL
AFSRARAAPTAQSQGGLAL
NT seq 2940 nt   +upstreamnt  +downstreamnt
atggctgacccgattcaaccgctggcgctggcggccgcgctcacccgccgcaccgagcaa
ctgtgcatcggcctggaacagggcatcgccgacctctacgagctggtgacgccggtgacc
gccgcgctgctgcgctggtggttcggggaggacgcgtgccagtcgcgcacgttcaatttc
caccccggccagaagcaggcgatcctcaacgtgatcgtggcgcacgaagtgctggccagt
ccgaacctgaaggacctgtaccagcaggtgtgcgccgacgcgctgctcgaaggcacgcgg
ctcgccgacgtggcgcaagacaagcacggccacccgaagtactgcctgaagatggccacc
ggtaccggcaagacctgggtgctgcaggcgctgctggtgtggcaactgctgaacaagacc
gcggcgctggacgaagggcgcgacgacccgcgcttcacccgccgcttcctgatcgtggcg
ccggggctgatcgtgtacgagcgcctgctcgatgcgttcctcggcaaggagaacgaggac
aagagccgcgacttcgccagctccgacatcgccagttacgccgagctgttcaccccaccg
gcgcggcgcgagcgcattgcgcagttcgtgcgcggcaacgtgtgccagaagcaggagatc
ggcctgaaggccaccggcaacggcatgatcgcgatcaccaactggcacctgctcagcgag
gccgaggaggaagcggagcaggaggaagccgcatgggtcgacacgcccggcatggtcgcc
gatgccgcccgcgtggcctacgacgtgctgccgctgaccccgggccgcgccaccggcaac
agcctcgatgtgctggaccggcgctgggcgcgtggcaacgtgctgagctatctcgccgac
ctgcccgacctgatggtgttcaacgacgaggcgcaccacatccatgaattgaaatcgggc
ggcgagaccagcgaggtcgaatggcagaagagcctgtcggtcatcgccgcgggcaagggc
cgccgcttcgtgcagatggatttctcggccacgccgtacaacgacgtcggcagcggcagg
aagaaggctaagctgtacttcccgcacatcgtggtggacttcgacctgaaggcggcgatg
cggctgggcctggtgaagtcgctggtgctggacaagcgcaaggaactcggcgcgctgccg
ctggagttcaaggccgagcgcgacggcgacggcaacgtggcgcttgccgagggtcagcgc
gtgatgctgcgcgccggcctgcagaagctgcgcaagctggaggcggatttcgcccggctc
gatcccggccgccacccgaagatgctggtggtgtgcgaggacaccacggtgtcgccgctg
gtggcacggttcctgtgcgaagaagggctgcatgacgacgacgtgctcaccgtcgattcc
ggcaggaaggccgaactgggcgagaaggactgggcgccgctgcgccagcgcctgttcaac
gtggaccggcacgcgcagccgcgggtgatcgtcagcgtgctgatgctgcgcgagggtttc
gacgtcaacaacatctgcgtgatcgtgccgctgcgttccagccaggcgcagatcctgctg
gagcagaccatcggccgcggcctgcgcctgatgtggcgcgacccggagtacgccgacatc
aagcgcgagaaccgcgagcggatcaaccgcggcgaggagccgggctcgctgatcgacatc
ctctccatcgtcgagcacccggcgttccagagcttctacgacgagctgatgcgcgaaggc
ctggtcggcagcaccggcgacgacgacgagggcagcagcatcggcgacctggtcgccgcc
gagctgcgcgaaggctacgagcagtatgacttcgccatcccgttcatcctgcgcgaggcg
gacgacagcgtcgaacacctgccgatcgacgtcgccgcactgccgagcttcagcgcgatg
agccgcgcgaagctggccgagctgctgggcaagggcgacaccttcacctcgcaggacctg
cagagcagcacgctgttcggcgactaccgcgtcgacggcgtggcgatggacgtcagcggc
tacaacgagctgctctccaggctgacccggcgggtgagccaggcgctgagccacccgctg
ccgaagggcaacaaggtttccccgcacctggaccgcccctatctgcaaatgaacaccgcg
gcgctggccacggcgctggacgactacatccgcgagcgactgttcggcgaagtcttcgag
ccgttcgagggcgagggctggcggctattgctgctgcagccggtgctcgaccacatcgtg
aagatcttcgccctggcgctggtgcgcgccgaggagcacaccgtgcgcggcagcaccgag
gtgcaccatcgccgtctttcggaagtgacgaagctgatggtgcgcgaaagcgcttcgctg
gaggtgtccaagtgcatctacacgcgcctgccgtacccgacccgcagcggcgggttggag
cgcgccttcatcgagtgggcgcaggcggacgccggcatcgaggcgttctgcaagatcagc
gagaaccgccacgacttcgcgcggctgcgctacatcaaggacgacggcctgcccgcgttc
tacatcccggatttcctggtgcgcacgaatgacgccatctatctggtggagaccaaggcg
cagcagcaggtcgggcacccgaacgtgcagcgcaagctgaaggcagccaccacctggtgc
gagcggatcaacgcgctggacgcggagcagcgcggcggccgcgtgtggcactacgcgctg
gtcggcgaatcgctattttacgactggcgggaaaagggcgcccggctgggcgagctgctg
gcgttctcgcgtgcacgggccgcgccgacggcgcagtcgcaaggtggcctggccctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system