KEGG   Rickettsia conorii subsp. heilongjiangensis: Rh054_05415
Entry
Rh054_05415       CDS       T01587                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rhe  Rickettsia conorii subsp. heilongjiangensis
Pathway
rhe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Rh054_05415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhe03021]
    Rh054_05415
   03400 DNA repair and recombination proteins [BR:rhe03400]
    Rh054_05415
Enzymes [BR:rhe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Rh054_05415
Transcription machinery [BR:rhe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Rh054_05415
DNA repair and recombination proteins [BR:rhe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Rh054_05415
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L IDH Par3_HAL_N_term
Other DBs
NCBI-ProteinID: AEK74983
Position
complement(937483..938505)
AA seq 340 aa
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYRVENTRVGQVTDYDKLIMFVETNGDVLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagtcgcgtatgaa
aattttccagaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacagggagcagct
atcacttctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcggaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gaaacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggaattaacttgcaaggttggtaaaggatatgtacttagcaca
aatagttatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaagagtgttacttatagggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgatgtattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcggttagatctgcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaatccgatatgctgagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatattcaggaattatctaaacgttatgaagattcttataat
taa

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