KEGG   Rodentibacter caecimuris: FEE42_06775
Entry
FEE42_06775       CDS       T06473                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rhey  Rodentibacter caecimuris
Pathway
rhey03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rhey00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FEE42_06775 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhey03021]
    FEE42_06775 (rpoA)
   03400 DNA repair and recombination proteins [BR:rhey03400]
    FEE42_06775 (rpoA)
Enzymes [BR:rhey01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FEE42_06775 (rpoA)
Transcription machinery [BR:rhey03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FEE42_06775 (rpoA)
DNA repair and recombination proteins [BR:rhey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FEE42_06775 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: QIA77077
UniProt: A0A1V3KU89
Position
complement(1350977..1351960)
AA seq 327 aa
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILTLNKSGIGPVVAADISHDGD
VEIVNQDHVICHLTDENASISMRIRVQRGRGYVPASTRIQIDERPIGRLLVDACYSPVES
ISYNVEAARVEQRTDLDKLVINLETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRQPEI
KEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPASIAED
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcagggttctgttacagaatttttaaaaccacgtttagtagatattgagcagattagc
tcaacacatgctaaggtgatccttgaaccgttagagcgtggctttggtcatactctaggt
aatgcattacgtcgtattcttctatcttcaatgccgggttgtgctgtaactgaagtagag
atcgagggagtactgcatgagtatagtagtaaggaaggtgttcaagaagatattcttgaa
gtgcttttaaaccttaaaggtctagcggtcaaagtacagaataaagatgatgttattctg
acactaaataaatctggaattggccctgttgttgcagcggatatctcccatgatggggat
gttgaaattgtaaatcaagaccatgtgatttgtcacttaactgacgaaaatgcttcgatt
agtatgcgtattcgcgttcagcgtggtagaggatatgttccagcttcaactcgcattcaa
atagatgaacgtccaattggtcgtttacttgttgatgcttgttatagccctgttgaaagc
atttcttataatgttgaagcagcccgtgttgaacaacgtacggacttggataaattagtt
attaatttagaaacaaatggtacgttggatcctgaggaagcaattcgtcgtgcagcaaca
atcttagcagagcaacttgatgcattcgttgatttacgtgatgttcgtcagcctgaaatt
aaggaagaaaaaccggagtttgatccgattttattacgtcctgtagatgatttagagttg
acagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgacttagta
caacgtacagaagttgagttattaaaaacacctaatctcggtaagaaatcgcttactgaa
attaaggatgtacttgcttcacgtggcttgtcacttggtatgcgccttgagaattggccg
ccagcaagtattgctgaagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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