KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_02955
Entry
EUB48_02955       CDS       T06165                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Pathway
rhf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EUB48_02955 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhf03019]
    EUB48_02955 (groL)
   03110 Chaperones and folding catalysts [BR:rhf03110]
    EUB48_02955 (groL)
   03029 Mitochondrial biogenesis [BR:rhf03029]
    EUB48_02955 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhf04147]
    EUB48_02955 (groL)
Enzymes [BR:rhf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     EUB48_02955 (groL)
Messenger RNA biogenesis [BR:rhf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     EUB48_02955 (groL)
Chaperones and folding catalysts [BR:rhf03110]
 Heat shock proteins
  HSP60 / Chaperonin
   EUB48_02955 (groL)
Mitochondrial biogenesis [BR:rhf03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    EUB48_02955 (groL)
Exosome [BR:rhf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   EUB48_02955 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   EUB48_02955 (groL)
  Exosomal proteins of breast cancer cells
   EUB48_02955 (groL)
  Exosomal proteins of colorectal cancer cells
   EUB48_02955 (groL)
  Exosomal proteins of bladder cancer cells
   EUB48_02955 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: QDL36375
UniProt: A0A515D7I1
Position
complement(621614..623266)
AA seq 550 aa
MAAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVHEGMKYVAAGMNPMDLKRGI
DKAVVALVEQLKKASKATTTSKEIAQVGSISANSDESIGKIIADAMDKVGKEGVITVEDG
KSLDNELDVVEGMQFDRGYLSPYFINNPEKQSALLDNPFVLLFDKKISNIRDLLPVLEQV
AKAGRPLLIIAEEVEGEALATLVVNTLRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGEAKDIEARVKQVRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGATTEIEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RAKQAAGTIKGDNADQDAGIKLVLKAIESPLREIVYNAGGEASVVVNAVLAGKGNYGFNA
ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTEAMVAESPKDEGPAGGGMPGGMG
GMGGMGDMGM
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggcagcaaaagacgtcattttcggcggcgaagcccgcgcgcgcatggtcgagggtgtg
aacatcctggccaatgcagtcaaggtcaccctgggccccaagggccgcaacgtggtgctc
gagcgttcgttcggcgcccccaccgtgaccaaggacggtgtgtccgtggccaaggaaatc
gaactgaaagacaagctgcagaacatgggcgcgcagatggtcaaggaagtcgcgtccaag
acctctgacaacgccggcgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cacgaaggcatgaagtacgtggccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtggtcgctttggtcgagcagctgaagaaagcctccaaggccaccaccacc
tccaaggaaattgcccaggttggctcgatttccgccaactctgacgaatccattggcaag
atcattgccgatgcgatggacaaggttggcaaggaaggcgtgatcaccgtggaagacggc
aagagcctggacaacgaactcgacgtggttgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaacaaccccgaaaagcaatccgcactgctggataacccgttcgtg
ctgctgttcgacaagaagatcagcaacatccgcgacctgctgcccgtgctcgagcaggtg
gccaaggccggccgtccgctgctcatcattgccgaagaagtcgagggcgaagccctggcc
acgctggtggtcaacaccctgcgcggcatcctgaaggtcgtggctgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcaaggtc
atcgccgaagaagtcggcctgacgctggaaaaagtcacgctggctgacctgggccaggcc
aagcgcatcgaggtgggcaaggaaaacaccaccatcatcgacggagccggcgaagccaag
gacatcgaagcccgcgtcaagcaggtgcgcgtgcagatcgaggaagccacctccgactac
gaccgcgaaaaactgcaggagcgtgttgcgaaactcgccggcggcgtggctgtgatcaag
gtcggtgcgaccaccgagatcgaaatgaaggaaaagaaggcgcgtgtcgaagacgccctg
cacgctacgcgcgctgcggtggaagaaggcatcgtggccggtggcggtgtggcgctgctg
cgcgccaagcaggccgcaggcaccatcaagggtgataacgccgaccaggacgcgggcatc
aagctggtcctcaaggccatcgaatccccgctgcgcgagattgtctacaacgctggtggc
gaagcctctgtcgtggtcaacgccgtgctggccggcaagggcaactatggcttcaacgca
gccaacgacacctatggcgacatgatcgagatgggcattctggacccgaccaaggtgacc
cgcaccgcactgcagaacgccgcctccgtggcctcgctgatgctgacgaccgaagccatg
gtggccgagtccccgaaggacgaaggtcctgctggcggcggcatgcccggcggcatgggc
ggcatgggcggcatgggcgacatgggcatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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